RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 CDCA3Q99618 268 aaPredicted RBP24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 TRIM6Q9C030 488 aaPredicted RBP24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 BHMT2Q9H2M3 363 aa24.44■■□□□ 1.5
SYNGR3-206ENST00000618464 DDHD2O94830 711 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 MUTP22033 750 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 CDC25AP30304 524 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 COASYQ13057 564 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 SMC1AQ14683 1233 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 DTHD1Q6ZMT9 781 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 RNF135Q8IUD6 432 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 ZBTB8OSQ8IWT0 167 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 VPS52Q8N1B4 723 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 SMRP1Q8NCR6 262 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 CNNM3Q8NE01 707 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 FAM193BQ96PV7 902 aaPredicted RBP24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 POP1Q99575 1024 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 NXF3Q9H4D5 531 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 MUTYHQ9UIF7 546 aa24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.43■■□□□ 1.5
SYNGR3-206ENST00000618464 LAD1O00515 517 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 NPTXRO95502 500 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 LIG1P18858 919 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 HOXD11P31277 338 aaPredicted RBP24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 MLH1P40692 756 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 RILPL1Q5EBL4 403 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 AUTS2Q8WXX7 1259 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 IGSF21Q96ID5 467 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 GAD1Q99259 594 aa24.42■■□□□ 1.5
SYNGR3-206ENST00000618464 CXCL14O95715 111 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 PRPHP41219 470 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 TMEM132AQ24JP5 1023 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 KRT79Q5XKE5 535 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 LARP1BQ659C4 914 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 CDCA2Q69YH5 1023 aaPredicted RBP24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 MRPL43Q8N983 215 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 DEPTORQ8TB45 409 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 ZFP42Q96MM3 310 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 UBN1Q9NPG3 1134 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 KANSL3Q9P2N6 904 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 STK24Q9Y6E0 443 aa24.41■■□□□ 1.5
SYNGR3-206ENST00000618464 FSD2A1L4K1 749 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 C2orf71A6NGG8 1288 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 ARL5CA6NH57 179 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 ATP2C1P98194 919 aaPredicted RBP24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 ZRSR1Q15695 479 aaKnown RBP24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 HERC4Q5GLZ8 1057 aaPredicted RBP24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 SLC27A1Q6PCB7 646 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 KIFC3Q9BVG8 833 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 ZBP1Q9H171 429 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 C2orf40Q9H1Z8 148 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 PRMT7Q9NVM4 692 aaPredicted RBP24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 USP20Q9Y2K6 914 aa24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 USP15Q9Y4E8 981 aaPredicted RBP24.4■■□□□ 1.5
SYNGR3-206ENST00000618464 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 CARNS1A5YM72 827 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 TTLL13PA6NNM8 815 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 E9PMD0 336 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 AKAP5P24588 427 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 NAMPTP43490 491 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 SCNN1GP51170 649 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 BMS1Q14692 1282 aaKnown RBP24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 PPP4R3CPQ6ZMV5 832 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 DDX53Q86TM3 631 aaKnown RBP24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 HACE1Q8IYU2 909 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 MMTAG2Q9BU76 263 aaKnown RBP24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 APOL5Q9BWW9 433 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 FZD8Q9H461 694 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 DNM3Q9UQ16 869 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 FAN1Q9Y2M0 1017 aa24.39■■□□□ 1.49
SYNGR3-206ENST00000618464 A0A1B0GUA9 196 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 ALDH2P05091 517 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 PRKCBP05771 671 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 SRGAP2BP0DMP2 458 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 KCNC3Q14003 757 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 MAPK6Q16659 721 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 IFT74Q96LB3 600 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 PRIMPOLQ96LW4 560 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 TMEM175Q9BSA9 504 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 VN1R3Q9BXE9 311 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 MIOSQ9NXC5 875 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 KLK14Q9P0G3 267 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 PARP2Q9UGN5 583 aa24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 PRG3Q9Y2Y8 225 aaPredicted RBP24.38■■□□□ 1.49
SYNGR3-206ENST00000618464 VWA3AA6NCI4 1184 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 LOC730098B7Z3J9 87 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 NRP1O14786 923 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 CLASP2O75122 1294 aaKnown RBP24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 SSBP05455 408 aaKnown RBP eCLIP24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 OR1G1P47890 313 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 PRPF4BQ13523 1007 aaKnown RBP24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 PPP2R5AQ15172 486 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 FAM187BQ17R55 369 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 ANKRD54Q6NXT1 300 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 HFE2Q6ZVN8 426 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 KCNK18Q7Z418 384 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 TMEM87AQ8NBN3 555 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 KIFAP3Q92845 792 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 CCDC113Q9H0I3 377 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 GIT1Q9Y2X7 761 aa24.37■■□□□ 1.49
SYNGR3-206ENST00000618464 EDN1P05305 212 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms