RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 KCNMB3Q9NPA1 279 aa13.04□□□□□ -0.32
SRRT-216ENST00000618262 DDX20Q9UHI6 824 aaKnown RBP13.04□□□□□ -0.32
SRRT-216ENST00000618262 KIAA1024Q9UPX6 916 aa13.04□□□□□ -0.32
SRRT-216ENST00000618262 CCT6AP40227 531 aaKnown RBP13.04□□□□□ -0.32
SRRT-216ENST00000618262 INHBCP55103 352 aa13.04□□□□□ -0.32
SRRT-216ENST00000618262 POLR2FP61218 127 aaKnown RBP13.04□□□□□ -0.32
SRRT-216ENST00000618262 THOC7Q6I9Y2 204 aaKnown RBP13.04□□□□□ -0.32
SRRT-216ENST00000618262 DYDC2Q96IM9 177 aa13.04□□□□□ -0.32
SRRT-216ENST00000618262 CEP295NLQ96MC4 621 aa13.04□□□□□ -0.32
SRRT-216ENST00000618262 KCNH3Q9ULD8 1083 aa13.04□□□□□ -0.32
SRRT-216ENST00000618262 ZNFX1Q9P2E3 1918 aaKnown RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 hCG_2014768A0A024R1R8 64 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 E9PMD0 336 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 ADCY3O60266 1144 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 MED24O75448 989 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 ZFXP17010 805 aaPredicted RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 UBE2HP62256 183 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 UGCGQ16739 394 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 TMEM266Q2M3C6 531 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 OLFML2BQ68BL8 750 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 SWSAP1Q6NVH7 229 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 OTOP1Q7RTM1 612 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 SUN5Q8TC36 379 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 MRPS27Q92552 414 aaKnown RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 ZNF668Q96K58 619 aaPredicted RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 INPP4AQ96PE3 977 aaPredicted RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 ZHX3Q9H4I2 956 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 SERTAD1Q9UHV2 236 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 KDM1AO60341 852 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 FOXD2O60548 495 aaPredicted RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 SMPD1P17405 629 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 RASA2Q15283 850 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 ADALQ6DHV7 355 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 MIS18BP1Q6P0N0 1132 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 CABP7Q86V35 215 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 USP6NLQ92738 828 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 TBC1D31Q96DN5 1066 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 SPATA33Q96N06 139 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 XPO4Q9C0E2 1151 aaKnown RBP13.03□□□□□ -0.32
SRRT-216ENST00000618262 DOCK5Q9H7D0 1870 aa13.03□□□□□ -0.32
SRRT-216ENST00000618262 EBAG9O00559 213 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 NOP56O00567 594 aaKnown RBP13.02□□□□□ -0.32
SRRT-216ENST00000618262 DHX15O43143 795 aaKnown RBP13.02□□□□□ -0.32
SRRT-216ENST00000618262 CYP3A4P08684 503 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 SYKP43405 635 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 KAZNQ674X7 775 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 PLA2G4FQ68DD2 849 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 CCDC170Q8IYT3 715 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 GBP7Q8N8V2 638 aaPredicted RBP13.02□□□□□ -0.32
SRRT-216ENST00000618262 ZFAND2BQ8WV99 257 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 GOLGA1Q92805 767 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 CDHR1Q96JP9 859 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 SDF4Q9BRK5 362 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 JPH1Q9HDC5 661 aaPredicted RBP13.02□□□□□ -0.32
SRRT-216ENST00000618262 ARFGAP3Q9NP61 516 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 DDX19AQ9NUU7 478 aaKnown RBP13.02□□□□□ -0.32
SRRT-216ENST00000618262 KIAA0100Q14667 2235 aaKnown RBP13.02□□□□□ -0.32
SRRT-216ENST00000618262 A0A0G2JMZ2 1700 aa13.02□□□□□ -0.32
SRRT-216ENST00000618262 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 SART1O43290 800 aaKnown RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 PLCG1P19174 1290 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 CIITAP33076 1130 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 CACNB2Q08289 660 aaPredicted RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 TAPT1Q6NXT6 567 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 DPH6Q7L8W6 267 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 CATSPER3Q86XQ3 398 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 AFG1LQ8WV93 481 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 CDK5RAP3Q96JB5 506 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 APBA2Q99767 749 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 TEKT3Q9BXF9 490 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 SRRDQ9UH36 339 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 VAV3Q9UKW4 847 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 ASB14A6NK59 587 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 P4HA2O15460 535 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 PPP6R2O75170 966 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 PSMD10O75832 226 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 ZNF202O95125 648 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 ENDOUP21128 410 aaKnown RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 SOX10P56693 466 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 IGBP1P78318 339 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 LRMPQ12912 555 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 TTC39BQ5VTQ0 682 aaPredicted RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 DYMQ7RTS9 669 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 ZMAT2Q96NC0 199 aaKnown RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 PPP1R16BQ96T49 567 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 VCX3BQ9H321 246 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 SLC39A2Q9NP94 309 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 DISC1Q9NRI5 854 aa13.02□□□□□ -0.33
SRRT-216ENST00000618262 PAIP2BQ9ULR5 123 aaKnown RBP13.02□□□□□ -0.33
SRRT-216ENST00000618262 PLXNB2O15031 1838 aa13.01□□□□□ -0.33
SRRT-216ENST00000618262 LCTP09848 1927 aa13.01□□□□□ -0.33
SRRT-216ENST00000618262 CYP3A7-CYP3A51PA0A087WV96 503 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms