RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 CLCN2P51788 898 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 EXOC3L4Q17RC7 722 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 ALKBH5Q6P6C2 394 aaKnown RBP11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 SLC30A9Q6PML9 568 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 SH3BP5LQ7L8J4 393 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 ABHD8Q96I13 439 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 BEGAINQ9BUH8 593 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 GANQ9H2C0 597 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 OSGEPQ9NPF4 335 aa11.54□□□□□ -0.56
PCDHGC3-202ENST00000611950 GOLGA8KD6RF30 607 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 FAM86B1E9PN63 330 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 FAM86B2P0C5J1 330 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 NMT1P30419 496 aaKnown RBP11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 HOXD13P35453 343 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 GCLCP48506 637 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 PAK2Q13177 524 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 MEI1Q5TIA1 1274 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 KIRREL3Q8IZU9 778 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 ERMNQ8TAM6 284 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 UBLCP1Q8WVY7 318 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 INPP4AQ96PE3 977 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 RUSC1Q9BVN2 902 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 SMIM23A6NLE4 172 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 MEIS2O14770 477 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 ATP2C2O75185 946 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 LRRN2O75325 713 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 XRCC5P13010 732 aaKnown RBP11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZNF76P36508 570 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 ARHGAP4P98171 946 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 MYBPC3Q14896 1274 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 CCDC92Q53HC0 331 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 FOXR2Q6PJQ5 311 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 DAAM2Q86T65 1068 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 ELMO3Q96BJ8 720 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 NT5C3AQ9H0P0 336 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 BATF3Q9NR55 127 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 FAM198AQ9UFP1 575 aa11.53□□□□□ -0.56
PCDHGC3-202ENST00000611950 TMEM221A6NGB7 291 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 PDLIM1O00151 329 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 TRIM49P0CI25 452 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 TRIM49CP0CI26 452 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 PRLRP16471 622 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 PON1P27169 355 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 TMOD1P28289 359 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 CYP2J2P51589 502 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 SLC12A3P55017 1021 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 SPIRE1Q08AE8 756 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZNF211Q13398 564 aaPredicted RBP11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 ZYXQ15942 572 aaKnown RBP11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 ARHGAP44Q17R89 818 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 RNF187Q5TA31 235 aaPredicted RBP11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 SLFN13Q68D06 897 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 USP38Q8NB14 1042 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 GIMAP1Q8WWP7 306 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 CRYGNQ8WXF5 182 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 LUC7LQ9NQ29 371 aaKnown RBP11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 NR2E1Q9Y466 385 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 KDM3AQ9Y4C1 1321 aa11.52□□□□□ -0.56
PCDHGC3-202ENST00000611950 DAPK3O43293 454 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 SHOX2O60902 331 aaPredicted RBP11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 FOSL1P15407 271 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 NR1D1P20393 614 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 GIT2Q14161 759 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 BTG3Q14201 252 aaPredicted RBP11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 ODF2Q5BJF6 829 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 IRF2BP2Q7Z5L9 587 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 GLYCTKQ8IVS8 523 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 TPH2Q8IWU9 490 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 PEX5LQ8IYB4 626 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 RNF10Q8N5U6 811 aaKnown RBP11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 METTL13Q8N6R0 699 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 RSRC1Q96IZ7 334 aaKnown RBP11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 CAPNS2Q96L46 248 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 CCDC17Q96LX7 622 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 ZDHHC15Q96MV8 337 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 SH3GL2Q99962 352 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 TRIM51Q9BSJ1 452 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 SEL1LQ9UBV2 794 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 NAGPAQ9UK23 515 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 NOC2LQ9Y3T9 749 aaKnown RBP11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 TRPM7Q96QT4 1865 aa11.52□□□□□ -0.57
PCDHGC3-202ENST00000611950 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 DCDC2CA8MYV0 355 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 E7EVH7 732 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 DDX39AO00148 427 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 EML1O00423 815 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 KRIT1O00522 736 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 TTI1O43156 1089 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 AFPP02771 609 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 ROR2Q01974 943 aaKnown RBP11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 COL19A1Q14993 1142 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 CERKLQ49MI3 558 aaPredicted RBP11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 AADACL2Q6P093 401 aa11.51□□□□□ -0.57
PCDHGC3-202ENST00000611950 PEX26Q7Z412 305 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms