RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 LRRC32Q14392 662 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 PCBP1Q15365 356 aaKnown RBP eCLIP2.56□□□□□ -2
ITGB5-213ENST00000608945 DHCR24Q15392 516 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 DDB1Q16531 1140 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 DGKDQ16760 1214 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 RNF187Q5TA31 235 aaPredicted RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 KANK2Q63ZY3 851 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 TMEM200BQ69YZ2 307 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 KLHDC10Q6PID8 442 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 Q6YL49 198 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 Q6ZRM9 215 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 ESPNLQ6ZVH7 1005 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 USP30Q70CQ3 517 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 FKBP9P1Q75LS8 142 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 RTN4RL1Q86UN2 441 aaPredicted RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 OR5AN1Q8NGI8 311 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 ADAMTS15Q8TE58 950 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 CFHR4Q92496 578 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 LPPQ93052 612 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 GFM2Q969S9 779 aaKnown RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 FOXRED1Q96CU9 486 aaPredicted RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 HIST1H2AHQ96KK5 128 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 C16orf92Q96LL3 132 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 TTC1Q99614 292 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 HIST1H2AJQ99878 128 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 OR10A2Q9H208 303 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 C12orf65Q9H3J6 166 aaKnown RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 IFT22Q9H7X7 185 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 MSL2Q9HCI7 577 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 KCMF1Q9P0J7 381 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 H2AFY2Q9P0M6 372 aaPredicted RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 SAE1Q9UBE0 346 aaPredicted RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 PUF60Q9UHX1 559 aaKnown RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 CDC42EP3Q9UKI2 254 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 APOBEC2Q9Y235 224 aaKnown RBP2.56□□□□□ -2
ITGB5-213ENST00000608945 VWA7Q9Y334 891 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 NR2E1Q9Y466 385 aa2.56□□□□□ -2
ITGB5-213ENST00000608945 GSG1L2A8MUP6 293 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 DVL2O14641 736 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 ARHGAP6O43182 974 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 ZEB2O60315 1214 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 IGSF3O75054 1194 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 FAM20BO75063 409 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 PRPF6O94906 941 aaKnown RBP2.55□□□□□ -2
ITGB5-213ENST00000608945 XPAP23025 273 aaPredicted RBP2.55□□□□□ -2
ITGB5-213ENST00000608945 RGS3P49796 1198 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 MRE11P49959 708 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 STAT5BP51692 787 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 HHEXQ03014 270 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 STRN3Q13033 797 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 EIF4HQ15056 248 aaKnown RBP2.55□□□□□ -2
ITGB5-213ENST00000608945 MAN2A1Q16706 1144 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 ATP13A4Q4VNC1 1196 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 LY6G5CQ5SRR4 150 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 GPR158Q5T848 1215 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 KIAA1841Q6NSI8 718 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 FRMD7Q6ZUT3 714 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 BMP8AQ7Z5Y6 402 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 FILIP1Q7Z7B0 1213 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 SMC1BQ8NDV3 1235 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 GCDHQ92947 438 aaPredicted RBP2.55□□□□□ -2
ITGB5-213ENST00000608945 DYDC2Q96IM9 177 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 MTFR1LQ9H019 292 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 POFUT1Q9H488 388 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 POLR3BQ9NW08 1133 aaPredicted RBP2.55□□□□□ -2
ITGB5-213ENST00000608945 MSRAQ9UJ68 235 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 DENND2AQ9ULE3 1009 aa2.55□□□□□ -2
ITGB5-213ENST00000608945 NOC2LQ9Y3T9 749 aaKnown RBP2.55□□□□□ -2
ITGB5-213ENST00000608945 A0A087X0B3 334 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.54□□□□□ -2
ITGB5-213ENST00000608945 GOLGA8BA8MQT2 603 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 CYP27B1O15528 508 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 KDM1AO60341 852 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 NRP2O60462 931 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 BRINP1O60477 761 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 MATN4O95460 622 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 ABHD16AO95870 558 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 STAT3P40763 770 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 ADCYAP1R1P41586 468 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 MASP1P48740 699 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 PHC1P78364 1004 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 SMAD3P84022 425 aaKnown RBP2.54□□□□□ -2
ITGB5-213ENST00000608945 FAPQ12884 760 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 NFYCQ13952 458 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 SEPT7Q16181 437 aaKnown RBP2.54□□□□□ -2
ITGB5-213ENST00000608945 CREB3L3Q68CJ9 461 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 KRT40Q6A162 431 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 TRIM68Q6AZZ1 485 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 ESRP1Q6NXG1 681 aaKnown RBP2.54□□□□□ -2
ITGB5-213ENST00000608945 RNF180Q86T96 592 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 THNSL2Q86YJ6 484 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 D2HGDHQ8N465 521 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 SH2D3CQ8N5H7 860 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 ZNF610Q8N9Z0 462 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 SIMC1Q8NDZ2 872 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 RTF1Q92541 710 aaKnown RBP2.54□□□□□ -2
ITGB5-213ENST00000608945 SLC5A5Q92911 643 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 WDR92Q96MX6 357 aa2.54□□□□□ -2
ITGB5-213ENST00000608945 NOL10Q9BSC4 688 aaKnown RBP2.54□□□□□ -2
ITGB5-213ENST00000608945 MYL10Q9BUA6 226 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms