RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 KRT17Q04695 432 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 TMEM132AQ24JP5 1023 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 FAM173BQ6P4H8 233 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 LRRC55Q6ZSA7 311 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 DAW1Q8N136 415 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 SPPL3Q8TCT6 385 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 CPB2Q96IY4 423 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 NTPCRQ9BSD7 190 aaKnown RBP21.18■□□□□ 0.98
SRSF4-206ENST00000605204 TMEM134Q9H6X4 195 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 CD320Q9NPF0 282 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 SPG21Q9NZD8 308 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 GIT1Q9Y2X7 761 aa21.18■□□□□ 0.98
SRSF4-206ENST00000605204 CCDC169A6NNP5 214 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 K7ERI5 159 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 B4GALT5O43286 388 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 PLS3P13797 630 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 MARCKSP29966 332 aaPredicted RBP21.17■□□□□ 0.98
SRSF4-206ENST00000605204 PEX3P56589 373 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 GRIN1Q05586 938 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 RNASELQ05823 741 aaKnown RBP21.17■□□□□ 0.98
SRSF4-206ENST00000605204 MAPK7Q13164 816 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 STK38Q15208 465 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 AGMOQ6ZNB7 445 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 SMG8Q8ND04 991 aaKnown RBP21.17■□□□□ 0.98
SRSF4-206ENST00000605204 POF1BQ8WVV4 589 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 LPPQ93052 612 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 ALG13Q9NP73 1137 aaKnown RBP21.17■□□□□ 0.98
SRSF4-206ENST00000605204 C11orf16Q9NQ32 467 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 KMT5AQ9NQR1 393 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 TBC1D13Q9NVG8 400 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 ARHGAP28Q9P2N2 729 aa21.17■□□□□ 0.98
SRSF4-206ENST00000605204 FNDC1Q4ZHG4 1894 aaPredicted RBP21.16■□□□□ 0.98
SRSF4-206ENST00000605204 PPP6R2O75170 966 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 F13A1P00488 732 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 ABCD1P33897 745 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 CEBPZQ03701 1054 aaKnown RBP21.16■□□□□ 0.98
SRSF4-206ENST00000605204 BECN1Q14457 450 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 KARSQ15046 597 aaKnown RBP21.16■□□□□ 0.98
SRSF4-206ENST00000605204 DCAF4L1Q3SXM0 396 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 LINC00301Q8NCQ3 95 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 MRPS27Q92552 414 aaKnown RBP21.16■□□□□ 0.98
SRSF4-206ENST00000605204 LARP4BQ92615 738 aaKnown RBP21.16■□□□□ 0.98
SRSF4-206ENST00000605204 RAD54LQ92698 747 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 KCNN1Q92952 543 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 PLIN2Q99541 437 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 EIF2AQ9BY44 585 aaKnown RBP21.16■□□□□ 0.98
SRSF4-206ENST00000605204 UBE2ZQ9H832 354 aaPredicted RBP21.16■□□□□ 0.98
SRSF4-206ENST00000605204 TLR9Q9NR96 1032 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 INPP5FQ9Y2H2 1132 aa21.16■□□□□ 0.98
SRSF4-206ENST00000605204 BCAR1P56945 870 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 BMS1Q14692 1282 aaKnown RBP21.15■□□□□ 0.98
SRSF4-206ENST00000605204 COL19A1Q14993 1142 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 CCDC73Q6ZRK6 1079 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 SLC39A11Q8N1S5 342 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 TMEM175Q9BSA9 504 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 KIFC3Q9BVG8 833 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 C1QTNF1Q9BXJ1 281 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 MRPL4Q9BYD3 311 aaKnown RBP21.15■□□□□ 0.98
SRSF4-206ENST00000605204 PDZD7Q9H5P4 517 aa21.15■□□□□ 0.98
SRSF4-206ENST00000605204 FAM86C2PA6NEL3 165 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 SPTLC2O15270 562 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 ZC3H11AO75152 810 aaKnown RBP eCLIP21.14■□□□□ 0.98
SRSF4-206ENST00000605204 NPTXRO95502 500 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 DDIT3P35638 169 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 TCEAL5Q5H9L2 206 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 GPBP1Q86WP2 473 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 KCNG4Q8TDN1 519 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 TMEM169Q96HH4 297 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 FAM193BQ96PV7 902 aaPredicted RBP21.14■□□□□ 0.98
SRSF4-206ENST00000605204 LRFN3Q9BTN0 628 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 NXF3Q9H4D5 531 aaKnown RBP21.14■□□□□ 0.98
SRSF4-206ENST00000605204 NGRNQ9NPE2 291 aaKnown RBP21.14■□□□□ 0.98
SRSF4-206ENST00000605204 BLOC1S4Q9NUP1 217 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 HCSTQ9UBK5 93 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 CFAP45Q9UL16 551 aa21.14■□□□□ 0.98
SRSF4-206ENST00000605204 C5orf42Q9H799 3197 aa21.14■□□□□ 0.97
SRSF4-206ENST00000605204 ARL5CA6NH57 179 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 MEIS3P2A8K0S8 358 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 STRN3Q13033 797 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 CAMK1Q14012 370 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 LONRF3Q496Y0 759 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 ATF7IP2Q5U623 682 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 PABPC5Q96DU9 382 aaKnown RBP21.13■□□□□ 0.97
SRSF4-206ENST00000605204 EPSTI1Q96J88 318 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 TNFSF13BQ9Y275 285 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 KIAA1671Q9BY89 1806 aa21.13■□□□□ 0.97
SRSF4-206ENST00000605204 TBCAO75347 108 aaKnown RBP21.12■□□□□ 0.97
SRSF4-206ENST00000605204 NR1I2O75469 434 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 KRT18P05783 430 aaKnown RBP21.12■□□□□ 0.97
SRSF4-206ENST00000605204 MLH1P40692 756 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 ZNF131P52739 623 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 ARSHQ5FYA8 562 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 RRAGBQ5VZM2 374 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 RPS6KC1Q96S38 1066 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 CDCA3Q99618 268 aaPredicted RBP21.12■□□□□ 0.97
SRSF4-206ENST00000605204 REEP2Q9BRK0 252 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 NRDE2Q9H7Z3 1164 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 PARVGQ9HBI0 331 aa21.12■□□□□ 0.97
SRSF4-206ENST00000605204 FAM13AO94988 1023 aa21.11■□□□□ 0.97
SRSF4-206ENST00000605204 LIG1P18858 919 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms