RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 STK17AQ9UEE5 414 aa18.44■□□□□ 0.54
SSBP4-213ENST00000602088 DAXXQ9UER7 740 aaPredicted RBP18.44■□□□□ 0.54
SSBP4-213ENST00000602088 ODF2LQ9ULJ1 636 aa18.44■□□□□ 0.54
SSBP4-213ENST00000602088 USP20Q9Y2K6 914 aa18.44■□□□□ 0.54
SSBP4-213ENST00000602088 ZDHHC9Q9Y397 364 aa18.44■□□□□ 0.54
SSBP4-213ENST00000602088 XIRP2A4UGR9 3374 aa18.44■□□□□ 0.54
SSBP4-213ENST00000602088 MYO7AQ13402 2215 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 MYH11P35749 1972 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 N4BP3O15049 544 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 FGF18O76093 207 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 NPTXRO95502 500 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 LIG1P18858 919 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 DNAJB1P25685 340 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 AFF1P51825 1210 aaKnown RBP18.43■□□□□ 0.54
SSBP4-213ENST00000602088 NT5DC1Q5TFE4 455 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 RRAGBQ5VZM2 374 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 TAS1R3Q7RTX0 852 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.43■□□□□ 0.542e-6■■■■□ 19.6
SSBP4-213ENST00000602088 ZNF558Q96NG5 402 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 REEP2Q9BRK0 252 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 NXF3Q9H4D5 531 aaKnown RBP18.43■□□□□ 0.54
SSBP4-213ENST00000602088 TBC1D13Q9NVG8 400 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 KCNG1Q9UIX4 513 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 INPP5FQ9Y2H2 1132 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 HES2Q9Y543 173 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 PHLPP2Q6ZVD8 1323 aa18.43■□□□□ 0.54
SSBP4-213ENST00000602088 SLC16A4O15374 487 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 PBX3P40426 434 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 SMTNP53814 917 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
SSBP4-213ENST00000602088 GIT2Q14161 759 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 TIGD5Q53EQ6 642 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 THNSL1Q8IYQ7 743 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 URGCPQ8TCY9 931 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 POF1BQ8WVV4 589 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 PANK2Q9BZ23 570 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 LARSQ9P2J5 1176 aaKnown RBP18.42■□□□□ 0.54
SSBP4-213ENST00000602088 KANSL3Q9P2N6 904 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 CFAP45Q9UL16 551 aa18.42■□□□□ 0.54
SSBP4-213ENST00000602088 PLXNA4Q9HCM2 1894 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 A0A087X0B3 334 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 INPPL1O15357 1258 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 CUTAO60888 179 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 PPM1AP35813 382 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 ALDH7A1P49419 539 aaKnown RBP18.41■□□□□ 0.54
SSBP4-213ENST00000602088 ZNF131P52739 623 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 BCAR1P56945 870 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 PLCB3Q01970 1234 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 UBE3AQ05086 875 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 DNM1Q05193 864 aaKnown RBP18.41■□□□□ 0.54
SSBP4-213ENST00000602088 SKIV2LQ15477 1246 aaKnown RBP18.41■□□□□ 0.54
SSBP4-213ENST00000602088 ATF7IP2Q5U623 682 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 EEF1DP3Q658K8 133 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 CCDC73Q6ZRK6 1079 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 HACE1Q8IYU2 909 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 TMEM161BQ8NDZ6 487 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 KCNG4Q8TDN1 519 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 NSUN3Q9H649 340 aaKnown RBP18.41■□□□□ 0.54
SSBP4-213ENST00000602088 NRDE2Q9H7Z3 1164 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 SPG21Q9NZD8 308 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 RCOR1Q9UKL0 485 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 GIT1Q9Y2X7 761 aa18.41■□□□□ 0.54
SSBP4-213ENST00000602088 ARL5CA6NH57 179 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 B4GALT3O60512 393 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.54
SSBP4-213ENST00000602088 KRT18P05783 430 aaKnown RBP18.4■□□□□ 0.54
SSBP4-213ENST00000602088 AKAP5P24588 427 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 MLH1P40692 756 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 NCKAP1LP55160 1127 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 RNASELQ05823 741 aaKnown RBP18.4■□□□□ 0.54
SSBP4-213ENST00000602088 AXDND1Q5T1B0 1012 aaPredicted RBP18.4■□□□□ 0.54
SSBP4-213ENST00000602088 ZNF280BQ86YH2 543 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 SLC39A11Q8N1S5 342 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 GAD1Q99259 594 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 ACO2Q99798 780 aaKnown RBP18.4■□□□□ 0.54
SSBP4-213ENST00000602088 ADPGKQ9BRR6 497 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 APOL6Q9BWW8 343 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 MRPL4Q9BYD3 311 aaKnown RBP18.4■□□□□ 0.54
SSBP4-213ENST00000602088 LZTS1Q9Y250 596 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 TNFSF13BQ9Y275 285 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 ATG2AQ2TAZ0 1938 aa18.4■□□□□ 0.54
SSBP4-213ENST00000602088 CARNS1A5YM72 827 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 NT5C1B-RDH14C9J2C7 533 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 DDHD2O94830 711 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 POMCP01189 267 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 GALTP07902 379 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 MAPTP10636 758 aaKnown RBP18.39■□□□□ 0.53
SSBP4-213ENST00000602088 IRS1P35568 1242 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 TCEAL5Q5H9L2 206 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 SHC4Q6S5L8 630 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 SV2BQ7L1I2 683 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 MYCT1Q8N699 235 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 MRPS27Q92552 414 aaKnown RBP18.39■□□□□ 0.53
SSBP4-213ENST00000602088 KCNN1Q92952 543 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 ZFP42Q96MM3 310 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 TARS2Q9BW92 718 aaKnown RBP18.39■□□□□ 0.53
SSBP4-213ENST00000602088 GBP3Q9H0R5 595 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 PARVGQ9HBI0 331 aa18.39■□□□□ 0.53
SSBP4-213ENST00000602088 PTPRHQ9HD43 1115 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms