RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 TMEM31Q5JXX7 168 aa25.1■■□□□ 1.61
SSBP4-209ENST00000601357 ANKRD54Q6NXT1 300 aa25.1■■□□□ 1.61
SSBP4-209ENST00000601357 SYCE2Q6PIF2 218 aa25.1■■□□□ 1.61
SSBP4-209ENST00000601357 BSNDQ8WZ55 320 aa25.1■■□□□ 1.61
SSBP4-209ENST00000601357 PRIMPOLQ96LW4 560 aa25.1■■□□□ 1.61
SSBP4-209ENST00000601357 ARHGEF35A5YM69 484 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 ARL5CA6NH57 179 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 LAD1O00515 517 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 CLASP2O75122 1294 aaKnown RBP25.09■■□□□ 1.61
SSBP4-209ENST00000601357 CXCL14O95715 111 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 POMCP01189 267 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 ALADP13716 330 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 CCT6AP40227 531 aaKnown RBP25.09■■□□□ 1.61
SSBP4-209ENST00000601357 PRPHP41219 470 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 FAM187BQ17R55 369 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 SLC27A1Q6PCB7 646 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 FZD8Q9H461 694 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 NXF3Q9H4D5 531 aaKnown RBP25.09■■□□□ 1.61
SSBP4-209ENST00000601357 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.09■■□□□ 1.61
SSBP4-209ENST00000601357 HCFC2Q9Y5Z7 792 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 TRIOO75962 3097 aa25.09■■□□□ 1.61
SSBP4-209ENST00000601357 TDRD15B5MCY1 1934 aaKnown RBP25.08■■□□□ 1.61
SSBP4-209ENST00000601357 LOC730098B7Z3J9 87 aa25.08■■□□□ 1.61
SSBP4-209ENST00000601357 MCM2P49736 904 aa25.08■■□□□ 1.61
SSBP4-209ENST00000601357 BMS1Q14692 1282 aaKnown RBP25.08■■□□□ 1.61
SSBP4-209ENST00000601357 IL17AQ16552 155 aa25.08■■□□□ 1.61
SSBP4-209ENST00000601357 LLGL2Q6P1M3 1020 aa25.08■■□□□ 1.61
SSBP4-209ENST00000601357 AUTS2Q8WXX7 1259 aa25.08■■□□□ 1.61
SSBP4-209ENST00000601357 GAD1Q99259 594 aa25.08■■□□□ 1.61
SSBP4-209ENST00000601357 PRMT7Q9NVM4 692 aaPredicted RBP25.08■■□□□ 1.61
SSBP4-209ENST00000601357 STK24Q9Y6E0 443 aa25.08■■□□□ 1.61
SSBP4-209ENST00000601357 NRP1O14786 923 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 DCXO43602 365 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 ALDH2P05091 517 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 HOXB8P17481 243 aaPredicted RBP25.07■■□□□ 1.6
SSBP4-209ENST00000601357 GJB2P29033 226 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 MLH1P40692 756 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 DSC1Q08554 894 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 GIT2Q14161 759 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 CDR2LQ86X02 465 aaPredicted RBP25.07■■□□□ 1.6
SSBP4-209ENST00000601357 COLGALT2Q8IYK4 626 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 CASP10Q92851 521 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 ZFP42Q96MM3 310 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 FAM193BQ96PV7 902 aaPredicted RBP25.07■■□□□ 1.6
SSBP4-209ENST00000601357 RAB34Q9BZG1 259 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 TRIM6Q9C030 488 aaPredicted RBP25.07■■□□□ 1.6
SSBP4-209ENST00000601357 CCDC113Q9H0I3 377 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 BHMT2Q9H2M3 363 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 MIOSQ9NXC5 875 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 STK39Q9UEW8 545 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 KIAA1024Q9UPX6 916 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 GIT1Q9Y2X7 761 aa25.07■■□□□ 1.6
SSBP4-209ENST00000601357 ZMYM2Q9UBW7 1377 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-209ENST00000601357 FAM86C2PA6NEL3 165 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 NAMPTP43490 491 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 CBX2Q14781 532 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-209ENST00000601357 RILPL1Q5EBL4 403 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 ZBTB8OSQ8IWT0 167 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 GSTCDQ8NEC7 633 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 SNX29Q8TEQ0 813 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 PHF7Q9BWX1 381 aaPredicted RBP25.06■■□□□ 1.6
SSBP4-209ENST00000601357 C2orf40Q9H1Z8 148 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 DDX19AQ9NUU7 478 aaKnown RBP25.06■■□□□ 1.6
SSBP4-209ENST00000601357 RAPGEFL1Q9UHV5 662 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 FAN1Q9Y2M0 1017 aa25.06■■□□□ 1.6
SSBP4-209ENST00000601357 TTLL13PA6NNM8 815 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 NPTXRO95502 500 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 EFEMP2O95967 443 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 SCNN1GP51170 649 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 PTPN14Q15678 1187 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 MCTP1Q6DN14 999 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 RNF135Q8IUD6 432 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 HACE1Q8IYU2 909 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 APOL6Q9BWW8 343 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 MARCH5Q9NX47 278 aa25.05■■□□□ 1.6
SSBP4-209ENST00000601357 PP2D1A8MPX8 630 aa25.04■■□□□ 1.6
SSBP4-209ENST00000601357 ATP2C1P98194 919 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-209ENST00000601357 HERC4Q5GLZ8 1057 aaPredicted RBP25.04■■□□□ 1.6
SSBP4-209ENST00000601357 SLC22A17Q8WUG5 538 aa25.04■■□□□ 1.6
SSBP4-209ENST00000601357 MMTAG2Q9BU76 263 aaKnown RBP25.04■■□□□ 1.6
SSBP4-209ENST00000601357 LILRB3O75022 631 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 AKAP5P24588 427 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 CA8P35219 290 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 PPP2R5AQ15172 486 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 MAPK6Q16659 721 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 DTHD1Q6ZMT9 781 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 RNF168Q8IYW5 571 aaPredicted RBP25.03■■□□□ 1.6
SSBP4-209ENST00000601357 KIFAP3Q92845 792 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 PDZD7Q9H5P4 517 aa25.03■■□□□ 1.6
SSBP4-209ENST00000601357 PRR33A8MZF0 331 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 ACKR2O00590 384 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 EDN1P05305 212 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 PRPF4BQ13523 1007 aaKnown RBP25.02■■□□□ 1.6
SSBP4-209ENST00000601357 TPRNQ4KMQ1 711 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 KRT79Q5XKE5 535 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 DEPTORQ8TB45 409 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 APOL5Q9BWW9 433 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 MUTYHQ9UIF7 546 aa25.02■■□□□ 1.6
SSBP4-209ENST00000601357 E9PMD0 336 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms