RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 TFF2Q03403 129 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 E2F4Q16254 413 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 MAPK6Q16659 721 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 AAK1Q2M2I8 961 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 NOMO2Q5JPE7 1267 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 KCNT2Q6UVM3 1135 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 MAEAQ7L5Y9 396 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 RNF168Q8IYW5 571 aaPredicted RBP9.7□□□□□ -0.86
SSBP4-208ENST00000600628 SLC39A11Q8N1S5 342 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 KRI1Q8N9T8 703 aaKnown RBP9.7□□□□□ -0.86
SSBP4-208ENST00000600628 HLA-CQ95604 372 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 DNAJC19Q96DA6 116 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 CPB2Q96IY4 423 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 CCDC43Q96MW1 224 aaKnown RBP9.7□□□□□ -0.86
SSBP4-208ENST00000600628 ACO2Q99798 780 aaKnown RBP9.7□□□□□ -0.86
SSBP4-208ENST00000600628 STRA6Q9BX79 667 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 MRPL9Q9BYD2 267 aaKnown RBP9.7□□□□□ -0.86
SSBP4-208ENST00000600628 NRDE2Q9H7Z3 1164 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 UBN1Q9NPG3 1134 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 RCOR1Q9UKL0 485 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 GIT1Q9Y2X7 761 aa9.7□□□□□ -0.86
SSBP4-208ENST00000600628 RBM19Q9Y4C8 960 aaKnown RBP9.7□□□□□ -0.86
SSBP4-208ENST00000600628 CARNS1A5YM72 827 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 ARL5CA6NH57 179 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 SPTLC2O15270 562 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 MEFVO15553 781 aaPredicted RBP9.69□□□□□ -0.86
SSBP4-208ENST00000600628 PPP1R37O75864 691 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 FGF18O76093 207 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 DDHD2O94830 711 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 PRKCBP05771 671 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 GALTP07902 379 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 MAPTP10636 758 aaKnown RBP9.69□□□□□ -0.86
SSBP4-208ENST00000600628 BMP1P13497 986 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 PLS3P13797 630 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 ANK1P16157 1881 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 SCP2P22307 547 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 NCKAP1LP55160 1127 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 PEX3P56589 373 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 GIT2Q14161 759 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 MCM6Q14566 821 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 TIGD5Q53EQ6 642 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 XKR4Q5GH76 650 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 SPECC1Q5M775 1068 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 EEF1DP3Q658K8 133 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 CNNM4Q6P4Q7 775 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 GLB1LQ6UWU2 654 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 ALKAL1Q6UXT8 129 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 PHLPP2Q6ZVD8 1323 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 TMEM173Q86WV6 379 aaPredicted RBP9.69□□□□□ -0.86
SSBP4-208ENST00000600628 ZNF280BQ86YH2 543 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 ZBTB8OSQ8IWT0 167 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 LARP4BQ92615 738 aaKnown RBP9.69□□□□□ -0.86
SSBP4-208ENST00000600628 PGBD4Q96DM1 585 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 IFT74Q96LB3 600 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 REEP2Q9BRK0 252 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 KIFC3Q9BVG8 833 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 VN1R3Q9BXE9 311 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 NXF3Q9H4D5 531 aaKnown RBP9.69□□□□□ -0.86
SSBP4-208ENST00000600628 ST6GALNAC4Q9H4F1 302 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 NSUN3Q9H649 340 aaKnown RBP9.69□□□□□ -0.86
SSBP4-208ENST00000600628 RSAD1Q9HA92 442 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 ALG13Q9NP73 1137 aaKnown RBP9.69□□□□□ -0.86
SSBP4-208ENST00000600628 MIOSQ9NXC5 875 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 KANSL3Q9P2N6 904 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 STK17AQ9UEE5 414 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 KCNG1Q9UIX4 513 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 TNFSF13BQ9Y275 285 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 HES2Q9Y543 173 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 PCDHB12Q9Y5F1 795 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 IRAK3Q9Y616 596 aa9.69□□□□□ -0.86
SSBP4-208ENST00000600628 NPHP3-ACAD11A0A0J9YXS1 232 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 PTGESO14684 152 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 N4BP3O15049 544 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 FAM189A1O60320 539 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 PIGRP01833 764 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 IRS1P35568 1242 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 PPM1AP35813 382 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 BCAR1P56945 870 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 ERVFC1P60507 584 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 HYAL1Q12794 435 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 PRPF4BQ13523 1007 aaKnown RBP9.68□□□□□ -0.86
SSBP4-208ENST00000600628 TCEAL5Q5H9L2 206 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 PDE12Q6L8Q7 609 aaKnown RBP9.68□□□□□ -0.86
SSBP4-208ENST00000600628 SHC4Q6S5L8 630 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 TMEM184AQ6ZMB5 413 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 CDR2LQ86X02 465 aaPredicted RBP9.68□□□□□ -0.86
SSBP4-208ENST00000600628 COLGALT2Q8IYK4 626 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 ABI1Q8IZP0 508 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 BCL7CQ8WUZ0 217 aaPredicted RBP9.68□□□□□ -0.86
SSBP4-208ENST00000600628 POF1BQ8WVV4 589 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 MRPS27Q92552 414 aaKnown RBP9.68□□□□□ -0.86
SSBP4-208ENST00000600628 PABPC5Q96DU9 382 aaKnown RBP9.68□□□□□ -0.86
SSBP4-208ENST00000600628 CALML4Q96GE6 196 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 IGSF21Q96ID5 467 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 ZFP42Q96MM3 310 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 ZNF558Q96NG5 402 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 PLIN2Q99541 437 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 TMEM175Q9BSA9 504 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 HAPLN2Q9GZV7 340 aa9.68□□□□□ -0.86
SSBP4-208ENST00000600628 AAASQ9NRG9 546 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms