RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 PPP6R2O75170 966 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 PLS3P13797 630 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 DDIT3P35638 169 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 PBX3P40426 434 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 SMTNP53814 917 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 KCNT2Q6UVM3 1135 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 SPPL3Q8TCT6 385 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 RNF39Q9H2S5 420 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 NXF3Q9H4D5 531 aaKnown RBP31.05■■■□□ 2.56
SSBP4-206ENST00000599699 PDZD7Q9H5P4 517 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 STK17AQ9UEE5 414 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 KCNG1Q9UIX4 513 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 PRUNE2Q8WUY3 3088 aa31.05■■■□□ 2.56
SSBP4-206ENST00000599699 SLC16A4O15374 487 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 FGF18O76093 207 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 ATL3Q6DD88 541 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 REEP2Q9BRK0 252 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 ADPGKQ9BRR6 497 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 PANK2Q9BZ23 570 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 GBP3Q9H0R5 595 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 TBC1D13Q9NVG8 400 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 CFAP45Q9UL16 551 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 ODF2LQ9ULJ1 636 aa31.04■■■□□ 2.56
SSBP4-206ENST00000599699 KIAA1671Q9BY89 1806 aa31.03■■■□□ 2.56
SSBP4-206ENST00000599699 PHLPP2Q6ZVD8 1323 aa31.03■■■□□ 2.56
SSBP4-206ENST00000599699 ZC3H11AO75152 810 aaKnown RBP eCLIP31.03■■■□□ 2.56
SSBP4-206ENST00000599699 ALDH7A1P49419 539 aaKnown RBP31.03■■■□□ 2.56
SSBP4-206ENST00000599699 DNM1Q05193 864 aaKnown RBP31.03■■■□□ 2.56
SSBP4-206ENST00000599699 CCDC73Q6ZRK6 1079 aa31.03■■■□□ 2.56
SSBP4-206ENST00000599699 POF1BQ8WVV4 589 aa31.03■■■□□ 2.56
SSBP4-206ENST00000599699 ZHX3Q9H4I2 956 aa31.03■■■□□ 2.56
SSBP4-206ENST00000599699 LARSQ9P2J5 1176 aaKnown RBP31.03■■■□□ 2.56
SSBP4-206ENST00000599699 ARHGAP28Q9P2N2 729 aa31.03■■■□□ 2.56
SSBP4-206ENST00000599699 FAM13AO94988 1023 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 EDN1P05305 212 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 PPM1AP35813 382 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 ATF7IP2Q5U623 682 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 KCNG4Q8TDN1 519 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 SPIRE2Q8WWL2 714 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 NSUN3Q9H649 340 aaKnown RBP31.02■■■□□ 2.56
SSBP4-206ENST00000599699 TMEM134Q9H6X4 195 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 SPG21Q9NZD8 308 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 KANSL3Q9P2N6 904 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 PARP2Q9UGN5 583 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 MYH15Q9Y2K3 1946 aa31.02■■■□□ 2.56
SSBP4-206ENST00000599699 CUTAO60888 179 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 TBCAO75347 108 aaKnown RBP31.01■■■□□ 2.55
SSBP4-206ENST00000599699 BRD1O95696 1058 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 POMCP01189 267 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 AKAP5P24588 427 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 DNAJB1P25685 340 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 MLH1P40692 756 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 STAT6P42226 847 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 BCAR1P56945 870 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 NT5DC1Q5TFE4 455 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 MYCT1Q8N699 235 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 FAM193BQ96PV7 902 aaPredicted RBP31.01■■■□□ 2.55
SSBP4-206ENST00000599699 GAD1Q99259 594 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 THEGQ9P2T0 379 aa31.01■■■□□ 2.55
SSBP4-206ENST00000599699 ARL5CA6NH57 179 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 ME1P48163 572 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 AFF1P51825 1210 aaKnown RBP31■■■□□ 2.55
SSBP4-206ENST00000599699 KRT17Q04695 432 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 STRN3Q13033 797 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 GIT2Q14161 759 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 TCEAL5Q5H9L2 206 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 EEF1DP3Q658K8 133 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 APBB1IPQ7Z5R6 666 aaPredicted RBP31■■■□□ 2.55
SSBP4-206ENST00000599699 PDILTQ8N807 584 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 MICAL1Q8TDZ2 1067 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 NTPCRQ9BSD7 190 aaKnown RBP31■■■□□ 2.55
SSBP4-206ENST00000599699 MRPL4Q9BYD3 311 aaKnown RBP31■■■□□ 2.55
SSBP4-206ENST00000599699 NRDE2Q9H7Z3 1164 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 PUF60Q9UHX1 559 aaKnown RBP31■■■□□ 2.55
SSBP4-206ENST00000599699 GIT1Q9Y2X7 761 aa31■■■□□ 2.55
SSBP4-206ENST00000599699 UBE3AQ05086 875 aa30.99■■■□□ 2.55
SSBP4-206ENST00000599699 SV2BQ7L1I2 683 aa30.99■■■□□ 2.55
SSBP4-206ENST00000599699 PARVGQ9HBI0 331 aa30.99■■■□□ 2.55
SSBP4-206ENST00000599699 NT5C1B-RDH14C9J2C7 533 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 CAMK1Q14012 370 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 DCAF4L1Q3SXM0 396 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 TAS1R3Q7RTX0 852 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 ZNF280BQ86YH2 543 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 TMEM161BQ8NDZ6 487 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 ZFP42Q96MM3 310 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 KLK14Q9P0G3 267 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 ZDHHC9Q9Y397 364 aa30.98■■■□□ 2.55
SSBP4-206ENST00000599699 H0YCG3 227 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 PLCB3Q01970 1234 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 DYMQ7RTS9 669 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 SLC39A11Q8N1S5 342 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 MRPS27Q92552 414 aaKnown RBP30.97■■■□□ 2.55
SSBP4-206ENST00000599699 HLA-CQ95604 372 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 ACO2Q99798 780 aaKnown RBP30.97■■■□□ 2.55
SSBP4-206ENST00000599699 TARS2Q9BW92 718 aaKnown RBP30.97■■■□□ 2.55
SSBP4-206ENST00000599699 TLR9Q9NR96 1032 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 DNAJB4Q9UDY4 337 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 TNFSF13BQ9Y275 285 aa30.97■■■□□ 2.55
SSBP4-206ENST00000599699 A0A087X0B3 334 aa30.96■■■□□ 2.55
SSBP4-206ENST00000599699 CARNS1A5YM72 827 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms