RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 PPP4R3CPQ6ZMV5 832 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 LRRC55Q6ZSA7 311 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 RPS6KC1Q96S38 1066 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 TCF25Q9BQ70 676 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 APOL6Q9BWW8 343 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 TBC1D13Q9NVG8 400 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 CCDC39Q9UFE4 941 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 PARP2Q9UGN5 583 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 GIT1Q9Y2X7 761 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 IPPQ9Y573 584 aa15.6■□□□□ 0.09
LIG1-218ENST00000599322 A0A1B0GUA9 196 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 H0YCG3 227 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 ACKR2O00590 384 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 KRT18P05783 430 aaKnown RBP15.59■□□□□ 0.09
LIG1-218ENST00000599322 NRIP1P48552 1158 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 PEX3P56589 373 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 GIT2Q14161 759 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 SMC1AQ14683 1233 aaKnown RBP15.59■□□□□ 0.09
LIG1-218ENST00000599322 HYIQ5T013 277 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 UBXN11Q5T124 520 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 CDCA2Q69YH5 1023 aaPredicted RBP15.59■□□□□ 0.09
LIG1-218ENST00000599322 AGMOQ6ZNB7 445 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 RBM23Q86U06 439 aaKnown RBP15.59■□□□□ 0.09
LIG1-218ENST00000599322 SLC39A11Q8N1S5 342 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 SYT2Q8N9I0 419 aaPredicted RBP15.59■□□□□ 0.09
LIG1-218ENST00000599322 PLIN2Q99541 437 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 TMEM175Q9BSA9 504 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 LRFN3Q9BTN0 628 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 FZD8Q9H461 694 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 KMT5AQ9NQR1 393 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 FAN1Q9Y2M0 1017 aa15.59■□□□□ 0.09
LIG1-218ENST00000599322 FNDC1Q4ZHG4 1894 aaPredicted RBP15.59■□□□□ 0.09
LIG1-218ENST00000599322 HIP1RO75146 1068 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 POMCP01189 267 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 PLA2G4BP0C869 781 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 HYAL1Q12794 435 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 STRN3Q13033 797 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 DCAF4L1Q3SXM0 396 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 PLPP4Q5VZY2 271 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 PTCRAQ6ISU1 281 aaPredicted RBP15.58■□□□□ 0.08
LIG1-218ENST00000599322 RINT1Q6NUQ1 792 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.58■□□□□ 0.08
LIG1-218ENST00000599322 ZNF396Q96N95 335 aaPredicted RBP15.58■□□□□ 0.08
LIG1-218ENST00000599322 EIF2AQ9BY44 585 aaKnown RBP15.58■□□□□ 0.08
LIG1-218ENST00000599322 NRDE2Q9H7Z3 1164 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 C11orf16Q9NQ32 467 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 LARSQ9P2J5 1176 aaKnown RBP15.58■□□□□ 0.08
LIG1-218ENST00000599322 HCSTQ9UBK5 93 aa15.58■□□□□ 0.08
LIG1-218ENST00000599322 NT5C1B-RDH14C9J2C7 533 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 H3BQ06 376 aaPredicted RBP15.57■□□□□ 0.08
LIG1-218ENST00000599322 B4GALT5O43286 388 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 GALTP07902 379 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 GUCY2CP25092 1073 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 DNAJB1P25685 340 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 PBX3P40426 434 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 CEBPZQ03701 1054 aaKnown RBP15.57■□□□□ 0.08
LIG1-218ENST00000599322 AMHR2Q16671 573 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 EFHBQ8N7U6 833 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 SMG8Q8ND04 991 aaKnown RBP15.57■□□□□ 0.08
LIG1-218ENST00000599322 GAD1Q99259 594 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 TCHPQ9BT92 498 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 MMTAG2Q9BU76 263 aaKnown RBP15.57■□□□□ 0.08
LIG1-218ENST00000599322 COLEC11Q9BWP8 271 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 MRPL4Q9BYD3 311 aaKnown RBP15.57■□□□□ 0.08
LIG1-218ENST00000599322 SSX2IPQ9Y2D8 614 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 C5orf42Q9H799 3197 aa15.57■□□□□ 0.08
LIG1-218ENST00000599322 ARL5CA6NH57 179 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 MEIS3P2A8K0S8 358 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 CXCL14O95715 111 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 IL9P15248 144 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 SCP2P22307 547 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 ABCD1P33897 745 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 IRS1P35568 1242 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 PLA2G5P39877 138 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 MLH1P40692 756 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 OR1G1P47890 313 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 NPTX2P47972 431 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 ERVFC1P60507 584 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 RESTQ13127 1097 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 ADAM15Q13444 863 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 CAMK1Q14012 370 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 DHX8Q14562 1220 aaKnown RBP15.56■□□□□ 0.08
LIG1-218ENST00000599322 STK38Q15208 465 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 ATF7IP2Q5U623 682 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 C1orf186Q6ZWK4 172 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 CDR2LQ86X02 465 aaPredicted RBP15.56■□□□□ 0.08
LIG1-218ENST00000599322 VPS52Q8N1B4 723 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 BSNDQ8WZ55 320 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 IGSF21Q96ID5 467 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 PNMA5Q96PV4 448 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 TMEM134Q9H6X4 195 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 POLD4Q9HCU8 107 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 HES2Q9Y543 173 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 ZMYM2Q9UBW7 1377 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 PLXNA4Q9HCM2 1894 aa15.56■□□□□ 0.08
LIG1-218ENST00000599322 FAM13AO94988 1023 aa15.55■□□□□ 0.08
LIG1-218ENST00000599322 PLS3P13797 630 aa15.55■□□□□ 0.08
LIG1-218ENST00000599322 AKAP5P24588 427 aa15.55■□□□□ 0.08
LIG1-218ENST00000599322 YARSP54577 528 aaKnown RBP15.55■□□□□ 0.08
LIG1-218ENST00000599322 RAD51AP2Q09MP3 1159 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms