RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 ARSHQ5FYA8 562 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 KLHL23Q8NBE8 558 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 SMG8Q8ND04 991 aaKnown RBP13.3□□□□□ -0.28
ZNF548-209ENST00000598895 CLP1Q92989 425 aaKnown RBP13.3□□□□□ -0.28
ZNF548-209ENST00000598895 PGBD4Q96DM1 585 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 TRIM6Q9C030 488 aaPredicted RBP13.3□□□□□ -0.28
ZNF548-209ENST00000598895 CCSER1Q9C0I3 900 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 CCDC113Q9H0I3 377 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 GBP3Q9H0R5 595 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 CWH43Q9H720 699 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 KMT5AQ9NQR1 393 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 PRMT7Q9NVM4 692 aaPredicted RBP13.3□□□□□ -0.28
ZNF548-209ENST00000598895 RWDD3Q9Y3V2 267 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 IPPQ9Y573 584 aa13.3□□□□□ -0.28
ZNF548-209ENST00000598895 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 SLC16A4O15374 487 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 SLC26A4O43511 780 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 GADD45BO75293 160 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 ITGA4P13612 1032 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 GUCY2CP25092 1073 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 AXLP30530 894 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 AFF1P51825 1210 aaKnown RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 DMP1Q13316 513 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 MAPK6Q16659 721 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 TPRNQ4KMQ1 711 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 GLB1LQ6UWU2 654 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 AGMOQ6ZNB7 445 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 PDILTQ8N807 584 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 COLGALT1Q8NBJ5 622 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 RNF214Q8ND24 703 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 LARP4BQ92615 738 aaKnown RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 REEP2Q9BRK0 252 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 C11orf84Q9BUA3 381 aaPredicted RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 TRAIPQ9BWF2 469 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 FZD8Q9H461 694 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 NXF3Q9H4D5 531 aaKnown RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 R3HCC1Q9Y3T6 440 aaKnown RBP13.29□□□□□ -0.28
ZNF548-209ENST00000598895 MYO9BQ13459 2157 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 CNTNAP2Q9UHC6 1331 aa13.29□□□□□ -0.28
ZNF548-209ENST00000598895 CDH23Q9H251 3354 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 A0A087X0B3 334 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 NT5C1B-RDH14C9J2C7 533 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 C5orf67F2Z3F1 127 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 K7ERI5 159 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 ZNF623O75123 536 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 YEATS4O95619 227 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 POMCP01189 267 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 ITGB1P05556 798 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 RB1P06400 928 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 AKAP5P24588 427 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 DNAJB1P25685 340 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 PCBP1Q15365 356 aaKnown RBP eCLIP13.28□□□□□ -0.28
ZNF548-209ENST00000598895 RRAGBQ5VZM2 374 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 EEF1DP3Q658K8 133 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 SLC27A1Q6PCB7 646 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 DYMQ7RTS9 669 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 MRPL10Q7Z7H8 261 aaKnown RBP13.28□□□□□ -0.28
ZNF548-209ENST00000598895 THNSL1Q8IYQ7 743 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 KCTD17Q8N5Z5 321 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 SLC17A8Q8NDX2 589 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 PRIMPOLQ96LW4 560 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 PDZD7Q9H5P4 517 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 RSAD1Q9HA92 442 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 AAASQ9NRG9 546 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 KLK14Q9P0G3 267 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 PCDHB12Q9Y5F1 795 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
ZNF548-209ENST00000598895 A0A1B0GUA9 196 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 GOLGA6L6A8MZA4 724 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 ACKR2O00590 384 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 CUTAO60888 179 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 ZC3H11AO75152 810 aaKnown RBP eCLIP13.27□□□□□ -0.29
ZNF548-209ENST00000598895 PPP6R2O75170 966 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 FAM13AO94988 1023 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 PLS3P13797 630 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 LAG3P18627 525 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 POU3F3P20264 500 aaPredicted RBP13.27□□□□□ -0.29
ZNF548-209ENST00000598895 MLH1P40692 756 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 STAT6P42226 847 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 ME1P48163 572 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 EFNA5P52803 228 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 KRT85P78386 507 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 RNASELQ05823 741 aaKnown RBP13.27□□□□□ -0.29
ZNF548-209ENST00000598895 PTPROQ16827 1216 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 FAM187BQ17R55 369 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 NOMO2Q5JPE7 1267 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 NT5DC1Q5TFE4 455 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 TAS1R3Q7RTX0 852 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 MYCT1Q8N699 235 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 URGCPQ8TCY9 931 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 STAMQ92783 540 aa13.27□□□□□ -0.29
ZNF548-209ENST00000598895 MRPL38Q96DV4 380 aaKnown RBP13.27□□□□□ -0.29
ZNF548-209ENST00000598895 CCDC51Q96ER9 411 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms