RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 IPPQ9Y573 584 aa15.65■□□□□ 0.1
SHKBP1-217ENST00000598558 TMEM265A0A087WTH1 108 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 TRAK2O60296 914 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 GADD45BO75293 160 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 OFD1O75665 1012 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 AFMP43652 599 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 ERVK-21P61565 698 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 BTG3Q14201 252 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 ADGRE1Q14246 886 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 FIBCD1Q8N539 461 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 GLIS3Q8NEA6 775 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 ARNTL2Q8WYA1 636 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 CDX2Q99626 313 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 C7orf25Q9BPX7 421 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 STRA6Q9BX79 667 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 HAPLN2Q9GZV7 340 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 BLZF1Q9H2G9 400 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 TNMDQ9H2S6 317 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 CUEDC2Q9H467 287 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 NXF3Q9H4D5 531 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 CWH43Q9H720 699 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 TYW1Q9NV66 732 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 MIOSQ9NXC5 875 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 TBC1D7Q9P0N9 293 aa15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 LARSQ9P2J5 1176 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-217ENST00000598558 B4GALT3O60512 393 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 LPXNO60711 386 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 SLFN14P0C7P3 912 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 IDEP14735 1019 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 CASP5P51878 434 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 CUL4BQ13620 913 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 ATF7IP2Q5U623 682 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 CNNM4Q6P4Q7 775 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 SLC27A1Q6PCB7 646 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 ZNF720Q7Z2F6 126 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 CMTR2Q8IYT2 770 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 MYLIPQ8WY64 445 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 KCNN1Q92952 543 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 CCDC51Q96ER9 411 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 PAGE5Q96GU1 130 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 TGS1Q96RS0 853 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 TMEM117Q9H0C3 514 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 PHLPP2Q6ZVD8 1323 aa15.63■□□□□ 0.09
SHKBP1-217ENST00000598558 TBCAO75347 108 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 PROZP22891 400 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 AKAP5P24588 427 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 SYKP43405 635 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 RAB27AP51159 221 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 SMTNP53814 917 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 GTF2BQ00403 316 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 NCBP1Q09161 790 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 KCNA1Q09470 495 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 EPC2Q52LR7 807 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 SLC39A4Q6P5W5 647 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 TMEM192Q8IY95 271 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 CEP120Q8N960 986 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 ENGASEQ8NFI3 743 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 MRPS27Q92552 414 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 CLP1Q92989 425 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 APOL6Q9BWW8 343 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 PANK4Q9NVE7 773 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 TBX20Q9UMR3 447 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 TNFSF13BQ9Y275 285 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 GBF1Q92538 1859 aa15.62■□□□□ 0.09
SHKBP1-217ENST00000598558 TISP43B9A030 160 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 ANKRD63C9JTQ0 380 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 K7ENM7 598 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 N4BP3O15049 544 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 MEFVO15553 781 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 KLRC4O43908 158 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 PPP1R37O75864 691 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 PRR29P0C7W0 189 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 MYBP10242 640 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 SKIP12755 728 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 ITGA4P13612 1032 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 BMPR1AP36894 532 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 EHHADHQ08426 723 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 COASYQ13057 564 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 SNW1Q13573 536 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 HERC4Q5GLZ8 1057 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 ZBTB33Q86T24 672 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 FAM178BQ8IXR5 827 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 FMR1NBQ8N0W7 255 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 GSTCDQ8NEC7 633 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 MRPL4Q9BYD3 311 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 CDT1Q9H211 546 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 ST6GALNAC4Q9H4F1 302 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 SNTG2Q9NY99 539 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 KLK14Q9P0G3 267 aa15.61■□□□□ 0.09
SHKBP1-217ENST00000598558 DDHD2O94830 711 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 ZNF202O95125 648 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 GAP43P17677 238 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 PBX3P40426 434 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 ASIC1P78348 528 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 SEZ6Q53EL9 994 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 NOMO2Q5JPE7 1267 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 KRBA2Q6ZNG9 492 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 ZNF280BQ86YH2 543 aa15.6■□□□□ 0.09
SHKBP1-217ENST00000598558 GDPD5Q8WTR4 605 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms