RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 ANKRD63C9JTQ0 380 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 USP8P40818 1118 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 PMS2P54278 862 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 SOX10P56693 466 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 ERMARDQ5T6L9 678 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 PRELID2Q8N945 189 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 KAT5Q92993 513 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 RAB17Q9H0T7 212 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 CARD9Q9H257 536 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 PARVGQ9HBI0 331 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 GRHL1Q9NZI5 618 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 HERC5Q9UII4 1024 aaKnown RBP16.53■□□□□ 0.24
ZNF541-205ENST00000595558 CCPG1Q9ULG6 757 aa16.53■□□□□ 0.24
ZNF541-205ENST00000595558 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.24
ZNF541-205ENST00000595558 EIF2AK2P19525 551 aaKnown RBP16.52■□□□□ 0.24
ZNF541-205ENST00000595558 FGFR4P22455 802 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 PTGIRP43119 386 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 RPL21P46778 160 aaKnown RBP16.52■□□□□ 0.24
ZNF541-205ENST00000595558 SPP2Q13103 211 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 ARHGEF19Q8IW93 802 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 FUKQ8N0W3 1084 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 LMO3Q8TAP4 145 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 BTBD6Q96KE9 485 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 LXNQ9BS40 222 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 ZNF536O15090 1300 aa16.52■□□□□ 0.24
ZNF541-205ENST00000595558 MYL7Q01449 175 aa16.52■□□□□ 0.23
ZNF541-205ENST00000595558 MAPK7Q13164 816 aa16.52■□□□□ 0.23
ZNF541-205ENST00000595558 ODR4Q5SWX8 454 aa16.52■□□□□ 0.23
ZNF541-205ENST00000595558 GKAP1Q5VSY0 366 aaPredicted RBP16.52■□□□□ 0.23
ZNF541-205ENST00000595558 FAM178BQ8IXR5 827 aa16.52■□□□□ 0.23
ZNF541-205ENST00000595558 EPS8L3Q8TE67 593 aaKnown RBP16.52■□□□□ 0.23
ZNF541-205ENST00000595558 PABPC3Q9H361 631 aaKnown RBP16.52■□□□□ 0.23
ZNF541-205ENST00000595558 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.23
ZNF541-205ENST00000595558 FTLP02792 175 aaPredicted RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 MMEP08473 750 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 PDE4CQ08493 712 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 CCDC38Q502W7 563 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 CYB5D1Q6P9G0 228 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 CCT6BQ92526 530 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 CHMP6Q96FZ7 201 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 FAM129AQ9BZQ8 928 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 RANBP17Q9H2T7 1088 aaKnown RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 UBE2TQ9NPD8 197 aaPredicted RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 KCNH7Q9NS40 1196 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 PTPN22Q9Y2R2 807 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 ANKRD62A6NC57 917 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 EIF3DO15371 548 aaKnown RBP eCLIP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 PPP1R12BO60237 982 aaPredicted RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 GAP43P17677 238 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 KCNJ1P48048 391 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 GSCP56915 257 aaPredicted RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 SP4Q02446 784 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 DAW1Q8N136 415 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 ATXN2LQ8WWM7 1075 aaKnown RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 ZNF317Q96PQ6 595 aaPredicted RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 POP1Q99575 1024 aaKnown RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 AGPAT1Q99943 283 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 DMAC2Q9NW81 257 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 USP20Q9Y2K6 914 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 FRMD4BQ9Y2L6 1034 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 ATP8B3O60423 1300 aa16.51■□□□□ 0.23
ZNF541-205ENST00000595558 ZNF646O15015 1829 aaPredicted RBP16.51■□□□□ 0.23
ZNF541-205ENST00000595558 FOXO6A8MYZ6 492 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 PIK3CDO00329 1044 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 EXOC3O60645 756 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 ATP9AO75110 1047 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 MYCLP12524 364 aaPredicted RBP16.5■□□□□ 0.23
ZNF541-205ENST00000595558 PLCB4Q15147 1175 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 CCDC91Q7Z6B0 441 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 CYP3A4P08684 503 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 PYGMP11217 842 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 PPP3CAQ08209 521 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 MESDQ14696 234 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 DENND2CQ68D51 928 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 LRRC34Q8IZ02 419 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 SLC5A5Q92911 643 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 HVCN1Q96D96 273 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 TAAR1Q96RJ0 339 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 PCDHB18PQ96TA0 734 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 KIFC3Q9BVG8 833 aa16.5■□□□□ 0.23
ZNF541-205ENST00000595558 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
ZNF541-205ENST00000595558 GOLGA6L10A0A0M3HER8 536 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 NUDT17P0C025 328 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 IFNAR2P48551 515 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 PRELPP51888 382 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 SETQ01105 290 aaPredicted RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 BFSP1Q12934 665 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 PRKG1Q13976 671 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 UGCGQ16739 394 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 HS2ST1Q7LGA3 356 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 C3orf20Q8ND61 904 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 PRMT1Q99873 361 aaKnown RBP16.49■□□□□ 0.23
ZNF541-205ENST00000595558 RIPK3Q9Y572 518 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 PCDHA3Q9Y5H8 950 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 EMSYQ7Z589 1322 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 HIP1RO75146 1068 aa16.49■□□□□ 0.23
ZNF541-205ENST00000595558 COMTP21964 271 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms