RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ACKR2O00590 384 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 KRT13P13646 458 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 GRK4P32298 578 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 ZNF410Q86VK4 478 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 CBWD2Q8IUF1 395 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 CNGA4Q8IV77 575 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 C7orf31Q8N865 590 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 CPLX3Q8WVH0 158 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 IQCDQ96DY2 449 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 ZBTB45Q96K62 511 aaPredicted RBP22.67■■□□□ 1.22
PNKP-203ENST00000593946 ACO2Q99798 780 aaKnown RBP22.67■■□□□ 1.22
PNKP-203ENST00000593946 TRIM17Q9Y577 477 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 PTCH2Q9Y6C5 1203 aa22.67■■□□□ 1.22
PNKP-203ENST00000593946 A0A0B4J269 797 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 TTC26A0AVF1 554 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 C17orf102A2RUQ5 167 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 INO80B-WBP1J3KQ70 363 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 RNF225M0QZC1 329 aaPredicted RBP22.66■■□□□ 1.22
PNKP-203ENST00000593946 TOM1L1O75674 476 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 CYP2C9P11712 490 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 TRIM21P19474 475 aaKnown RBP22.66■■□□□ 1.22
PNKP-203ENST00000593946 VAMP7P51809 220 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 FAM187BQ17R55 369 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 RUFY4Q6ZNE9 571 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 INO80BQ9C086 356 aaPredicted RBP22.66■■□□□ 1.22
PNKP-203ENST00000593946 TMX1Q9H3N1 280 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 KIAA1586Q9HCI6 787 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 AGO2Q9UKV8 859 aaKnown RBP22.66■■□□□ 1.22
PNKP-203ENST00000593946 CAPN11Q9UMQ6 739 aa22.66■■□□□ 1.22
PNKP-203ENST00000593946 GTPBP10A4D1E9 387 aaKnown RBP22.65■■□□□ 1.22
PNKP-203ENST00000593946 ESPNB1AK53 854 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 TREHO43280 583 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 EXTL3O43909 919 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 ASGR1P07306 291 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 IQCF3P0C7M6 154 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 TRIM49P0CI25 452 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 TRIM49CP0CI26 452 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 GNAT1P11488 350 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 NLRP11P59045 1033 aaKnown RBP22.65■■□□□ 1.22
PNKP-203ENST00000593946 KCNA10Q16322 511 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 MFSD14AQ96MC6 490 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 PCMTD1Q96MG8 357 aaPredicted RBP22.65■■□□□ 1.22
PNKP-203ENST00000593946 PANX2Q96RD6 677 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 PPP1R16BQ96T49 567 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 PRMT7Q9NVM4 692 aaPredicted RBP22.65■■□□□ 1.22
PNKP-203ENST00000593946 ANKFY1Q9P2R3 1169 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 CDC42EP1Q00587 391 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 NBPF20Q3BBV1 942 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 TSHZ1Q6ZSZ6 1077 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 PCSK9Q8NBP7 692 aaKnown RBP22.65■■□□□ 1.22
PNKP-203ENST00000593946 CCDC112Q8NEF3 446 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 PLEKHO2Q8TD55 490 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 NLRP7Q8WX94 980 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 FAM49AQ9H0Q0 323 aaPredicted RBP22.65■■□□□ 1.22
PNKP-203ENST00000593946 ADAMTS10Q9H324 1103 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 MMRN2Q9H8L6 949 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 WBP1LQ9NX94 342 aa22.65■■□□□ 1.22
PNKP-203ENST00000593946 A0A1W2PQJ5 194 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 ABLIM1O14639 778 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 SKILP12757 684 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 PROZP22891 400 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 FMO5P49326 533 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 DLG4P78352 724 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 ZNF200P98182 395 aaPredicted RBP22.64■■□□□ 1.21
PNKP-203ENST00000593946 ENPEPQ07075 957 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 CYP24A1Q07973 514 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 PRPF4BQ13523 1007 aaKnown RBP22.64■■□□□ 1.21
PNKP-203ENST00000593946 AMHR2Q16671 573 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 C1orf220Q5T0J3 134 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 TMEM139Q8IV31 216 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 CCDC51Q96ER9 411 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 FAM213AQ9BRX8 229 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 CRACR2AQ9BSW2 395 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 MSTO1Q9BUK6 570 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 HMX1Q9NP08 348 aaPredicted RBP22.64■■□□□ 1.21
PNKP-203ENST00000593946 FAM207AQ9NSI2 230 aaPredicted RBP22.64■■□□□ 1.21
PNKP-203ENST00000593946 GTF2IRD1Q9UHL9 959 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 PYCARDQ9ULZ3 195 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 BRCA2P51587 3418 aa22.64■■□□□ 1.21
PNKP-203ENST00000593946 EPHB6O15197 1021 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 CLDN3O15551 220 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 GPR32O75388 356 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 LDHAP00338 332 aaKnown RBP22.63■■□□□ 1.21
PNKP-203ENST00000593946 HSP90AA2PQ14568 343 aaPredicted RBP22.63■■□□□ 1.21
PNKP-203ENST00000593946 SRGAP1Q7Z6B7 1085 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 TMC2Q8TDI7 906 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 PARD3BQ8TEW8 1205 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 PRIMPOLQ96LW4 560 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 PTPRHQ9HD43 1115 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 LUC7L2Q9Y383 392 aaKnown RBP22.63■■□□□ 1.21
PNKP-203ENST00000593946 ANK1P16157 1881 aa22.63■■□□□ 1.21
PNKP-203ENST00000593946 ZNF233A6NK53 670 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 B4GALT5O43286 388 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 KRT9P35527 623 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 MCL1Q07820 350 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 EXOC3L4Q17RC7 722 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 KIZQ2M2Z5 673 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 CBWD6Q4V339 395 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 CBWD3Q5JTY5 395 aa22.62■■□□□ 1.21
PNKP-203ENST00000593946 CBWD5Q5RIA9 395 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms