RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 UBE3AQ05086 875 aa24.66■■□□□ 1.54
MBD3-208ENST00000590830 PRPF4BQ13523 1007 aaKnown RBP24.66■■□□□ 1.54
MBD3-208ENST00000590830 PKP1Q13835 747 aa24.66■■□□□ 1.54
MBD3-208ENST00000590830 ADGRD2Q7Z7M1 963 aa24.66■■□□□ 1.54
MBD3-208ENST00000590830 SPG21Q9NZD8 308 aa24.66■■□□□ 1.54
MBD3-208ENST00000590830 TFIP11Q9UBB9 837 aaKnown RBP24.66■■□□□ 1.54
MBD3-208ENST00000590830 DNAJB4Q9UDY4 337 aa24.66■■□□□ 1.54
MBD3-208ENST00000590830 MORC2Q9Y6X9 1032 aaPredicted RBP24.66■■□□□ 1.54
MBD3-208ENST00000590830 CCDC169A6NNP5 214 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 POMCP01189 267 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 GALTP07902 379 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 NASPP49321 788 aaPredicted RBP24.65■■□□□ 1.54
MBD3-208ENST00000590830 KCNQ1P51787 676 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 EFNA5P52803 228 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 TJAP1Q5JTD0 557 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 EEF1DP3Q658K8 133 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 TAS1R3Q7RTX0 852 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 TMEM173Q86WV6 379 aaPredicted RBP24.65■■□□□ 1.54
MBD3-208ENST00000590830 RSPH1Q8WYR4 309 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 MRPS27Q92552 414 aaKnown RBP24.65■■□□□ 1.54
MBD3-208ENST00000590830 DRC1Q96MC2 740 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 GAD1Q99259 594 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 TIPINQ9BVW5 301 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 APOL6Q9BWW8 343 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 UBE2ZQ9H832 354 aaPredicted RBP24.65■■□□□ 1.54
MBD3-208ENST00000590830 ATG2AQ2TAZ0 1938 aa24.65■■□□□ 1.54
MBD3-208ENST00000590830 ARL5CA6NH57 179 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 FSCN2O14926 492 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 INPPL1O15357 1258 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 ZC3H11AO75152 810 aaKnown RBP eCLIP24.64■■□□□ 1.54
MBD3-208ENST00000590830 ZSCAN22P10073 491 aaPredicted RBP24.64■■□□□ 1.54
MBD3-208ENST00000590830 BMP1P13497 986 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 AKAP5P24588 427 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 CACNB1Q02641 598 aaPredicted RBP24.64■■□□□ 1.54
MBD3-208ENST00000590830 MCM6Q14566 821 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 BCL7CQ8WUZ0 217 aaPredicted RBP24.64■■□□□ 1.54
MBD3-208ENST00000590830 RAD54LQ92698 747 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 SYMPKQ92797 1274 aaKnown RBP24.64■■□□□ 1.54
MBD3-208ENST00000590830 ZFP42Q96MM3 310 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 NTPCRQ9BSD7 190 aaKnown RBP24.64■■□□□ 1.54
MBD3-208ENST00000590830 TRIM6Q9C030 488 aaPredicted RBP24.64■■□□□ 1.54
MBD3-208ENST00000590830 UBN1Q9NPG3 1134 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 ARHGAP28Q9P2N2 729 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 LZTS1Q9Y250 596 aa24.64■■□□□ 1.54
MBD3-208ENST00000590830 PLXNA4Q9HCM2 1894 aa24.64■■□□□ 1.53
MBD3-208ENST00000590830 K7ERI5 159 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 DLL1O00548 723 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 SLC11A1P49279 550 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 ALDH7A1P49419 539 aaKnown RBP24.63■■□□□ 1.53
MBD3-208ENST00000590830 RNASELQ05823 741 aaKnown RBP24.63■■□□□ 1.53
MBD3-208ENST00000590830 DHX8Q14562 1220 aaKnown RBP24.63■■□□□ 1.53
MBD3-208ENST00000590830 CTC1Q2NKJ3 1217 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 LINC00301Q8NCQ3 95 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 GSTCDQ8NEC7 633 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 URGCPQ8TCY9 931 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 GBP3Q9H0R5 595 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 C17orf75Q9HAS0 396 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 KMT5AQ9NQR1 393 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 TLR9Q9NR96 1032 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 KCND2Q9NZV8 630 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 GIT1Q9Y2X7 761 aa24.63■■□□□ 1.53
MBD3-208ENST00000590830 N4BP3O15049 544 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 SLC16A4O15374 487 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 PLS3P13797 630 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 PPM1AP35813 382 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 LTBRP36941 435 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 MLH1P40692 756 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 DMP1Q13316 513 aaPredicted RBP24.62■■□□□ 1.53
MBD3-208ENST00000590830 GPBP1Q86WP2 473 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 SPIRE2Q8WWL2 714 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 PABPC5Q96DU9 382 aaKnown RBP24.62■■□□□ 1.53
MBD3-208ENST00000590830 IGFLR1Q9H665 355 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 TMEM134Q9H6X4 195 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 KLK14Q9P0G3 267 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 KANSL3Q9P2N6 904 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 BRWD1Q9NSI6 2320 aa24.62■■□□□ 1.53
MBD3-208ENST00000590830 LINC01565O15544 149 aa24.61■■□□□ 1.53
MBD3-208ENST00000590830 F13A1P00488 732 aa24.61■■□□□ 1.53
MBD3-208ENST00000590830 KCNA5P22460 613 aa24.61■■□□□ 1.53
MBD3-208ENST00000590830 DDIT3P35638 169 aa24.61■■□□□ 1.53
MBD3-208ENST00000590830 KRT17Q04695 432 aa24.61■■□□□ 1.53
MBD3-208ENST00000590830 KRI1Q8N9T8 703 aaKnown RBP24.61■■□□□ 1.53
MBD3-208ENST00000590830 MICAL1Q8TDZ2 1067 aa24.61■■□□□ 1.53
MBD3-208ENST00000590830 CXCL16Q9H2A7 254 aa24.61■■□□□ 1.53
MBD3-208ENST00000590830 PUF60Q9UHX1 559 aaKnown RBP24.61■■□□□ 1.53
MBD3-208ENST00000590830 RBM19Q9Y4C8 960 aaKnown RBP24.61■■□□□ 1.53
MBD3-208ENST00000590830 SCNN1GP51170 649 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 DLX2Q07687 328 aaPredicted RBP24.6■■□□□ 1.53
MBD3-208ENST00000590830 GIT2Q14161 759 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 TMEM132AQ24JP5 1023 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 FOXD4L6Q3SYB3 417 aaPredicted RBP24.6■■□□□ 1.53
MBD3-208ENST00000590830 ATF7IP2Q5U623 682 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 FOXD4L3Q6VB84 417 aaPredicted RBP24.6■■□□□ 1.53
MBD3-208ENST00000590830 RBM23Q86U06 439 aaKnown RBP24.6■■□□□ 1.53
MBD3-208ENST00000590830 TMEM161BQ8NDZ6 487 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 RASSF8Q8NHQ8 419 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 IGSF21Q96ID5 467 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 ACO2Q99798 780 aaKnown RBP24.6■■□□□ 1.53
MBD3-208ENST00000590830 REEP2Q9BRK0 252 aa24.6■■□□□ 1.53
MBD3-208ENST00000590830 VN1R3Q9BXE9 311 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms