RNA–Protein interactions for RNA: ENST00000590635.5

CTDP1-206, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 5

Gene CTDP1, Length 489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-206ENST00000590635 ODF2LQ9ULJ1 636 aa13.41□□□□□ -0.26
CTDP1-206ENST00000590635 FAM50BQ9Y247 325 aa13.41□□□□□ -0.26
CTDP1-206ENST00000590635 INPP5FQ9Y2H2 1132 aa13.41□□□□□ -0.26
CTDP1-206ENST00000590635 ARID2Q68CP9 1835 aa13.41□□□□□ -0.26
CTDP1-206ENST00000590635 ARL5CA6NH57 179 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 B4GALT5O43286 388 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 ZC3H11AO75152 810 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTDP1-206ENST00000590635 DDIT3P35638 169 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 NPTX2P47972 431 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 DCAF4L1Q3SXM0 396 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 LEXMQ3ZCV2 418 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 LONRF3Q496Y0 759 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 ATL3Q6DD88 541 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 KCNK18Q7Z418 384 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 SLC39A11Q8N1S5 342 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 KRI1Q8N9T8 703 aaKnown RBP13.4□□□□□ -0.26
CTDP1-206ENST00000590635 PLIN2Q99541 437 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 RUSC1Q9BVN2 902 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 CCDC113Q9H0I3 377 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 NRDE2Q9H7Z3 1164 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 TLE6Q9H808 572 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 FNDC1Q4ZHG4 1894 aaPredicted RBP13.4□□□□□ -0.26
CTDP1-206ENST00000590635 NLRC5Q86WI3 1866 aa13.4□□□□□ -0.26
CTDP1-206ENST00000590635 MEIS3P2A8K0S8 358 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 NPTXRO95502 500 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 GALTP07902 379 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 SRGAP2BP0DMP2 458 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 BMP1P13497 986 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 PLS3P13797 630 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 LIG1P18858 919 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 KCNA5P22460 613 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 DNAJB1P25685 340 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 MARCKSP29966 332 aaPredicted RBP13.39□□□□□ -0.27
CTDP1-206ENST00000590635 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
CTDP1-206ENST00000590635 TFF2Q03403 129 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 CEBPZQ03701 1054 aaKnown RBP13.39□□□□□ -0.27
CTDP1-206ENST00000590635 STRN3Q13033 797 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 STK38Q15208 465 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 CTC1Q2NKJ3 1217 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 TMC7Q7Z402 723 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 DDX53Q86TM3 631 aaKnown RBP13.39□□□□□ -0.27
CTDP1-206ENST00000590635 DAW1Q8N136 415 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 IGSF21Q96ID5 467 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 USP28Q96RU2 1077 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 GAD1Q99259 594 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 TCF25Q9BQ70 676 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
CTDP1-206ENST00000590635 MRPL4Q9BYD3 311 aaKnown RBP13.39□□□□□ -0.27
CTDP1-206ENST00000590635 ENTPD7Q9NQZ7 604 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 CLDND1Q9NY35 253 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 STK17AQ9UEE5 414 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 PARP2Q9UGN5 583 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 FBXO2Q9UK22 296 aaPredicted RBP13.39□□□□□ -0.27
CTDP1-206ENST00000590635 TNFSF13BQ9Y275 285 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 FAN1Q9Y2M0 1017 aa13.39□□□□□ -0.27
CTDP1-206ENST00000590635 COL4A4P53420 1690 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-206ENST00000590635 FSCN2O14926 492 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 PPP6R2O75170 966 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 POMCP01189 267 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
CTDP1-206ENST00000590635 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
CTDP1-206ENST00000590635 PLCG1P19174 1290 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 ERVFC1P60507 584 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 HYAL1Q12794 435 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 MAPK7Q13164 816 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 ADAM15Q13444 863 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 SMC1AQ14683 1233 aaKnown RBP13.38□□□□□ -0.27
CTDP1-206ENST00000590635 KARSQ15046 597 aaKnown RBP13.38□□□□□ -0.27
CTDP1-206ENST00000590635 ATF7IP2Q5U623 682 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 CCDC73Q6ZRK6 1079 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 EFHBQ8N7U6 833 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 TMEM87AQ8NBN3 555 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 LARP4BQ92615 738 aaKnown RBP13.38□□□□□ -0.27
CTDP1-206ENST00000590635 RAD54LQ92698 747 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 KCNN1Q92952 543 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 RPS6KC1Q96S38 1066 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 APOL6Q9BWW8 343 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 GBP3Q9H0R5 595 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 NXF3Q9H4D5 531 aaKnown RBP13.38□□□□□ -0.27
CTDP1-206ENST00000590635 PDZD7Q9H5P4 517 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 POLD4Q9HCU8 107 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 HCSTQ9UBK5 93 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 CFAP45Q9UL16 551 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 SSX2IPQ9Y2D8 614 aa13.38□□□□□ -0.27
CTDP1-206ENST00000590635 SFI1A8K8P3 1242 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 YEATS4O95619 227 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 IRS1P35568 1242 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 MLH1P40692 756 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 GRIN1Q05586 938 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 GRIK3Q13003 919 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 RRAGBQ5VZM2 374 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 GPBP1Q86WP2 473 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 ZNF280BQ86YH2 543 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 MRPL43Q8N983 215 aaKnown RBP13.37□□□□□ -0.27
CTDP1-206ENST00000590635 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 EPSTI1Q96J88 318 aa13.37□□□□□ -0.27
CTDP1-206ENST00000590635 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms