RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 EPHB6O15197 1021 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 GLIS3Q8NEA6 775 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 MDM1Q8TC05 714 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 HERC5Q9UII4 1024 aaKnown RBP18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 ARHGAP42A6NI28 874 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 MAPK13O15264 365 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 HSPA9P38646 679 aaKnown RBP18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 IGBP1P78318 339 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 SLFN12LQ6IEE8 588 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 DARS2Q6PI48 645 aaKnown RBP18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 ERICH1Q86X53 443 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 MCPH1Q8NEM0 835 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 ACTRT1Q8TDG2 376 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 RBM41Q96IZ5 413 aaKnown RBP18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 KCND2Q9NZV8 630 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 INO80B-WBP1J3KQ70 363 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 PSMC6P62333 389 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 LMBRD2Q68DH5 695 aaPredicted RBP18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 SCYL3Q8IZE3 742 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 MTMR9Q96QG7 549 aa18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 INO80BQ9C086 356 aaPredicted RBP18.29■□□□□ 0.52
SMARCA4-215ENST00000590574 SCP2P22307 547 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 AGPAT3Q9NRZ7 376 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 UBE4BO95155 1302 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 SLC27A3Q5K4L6 730 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 C4orf32Q8N8J7 132 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 MTRQ99707 1265 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 GINM1Q9NU53 330 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 PJA2O43164 708 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 PSMA2P25787 234 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 SFNP31947 248 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 SARNPP82979 210 aaKnown RBP18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 NFIAQ12857 509 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 STRIP1Q5VSL9 837 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 MAP7D3Q8IWC1 876 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 GPD1LQ8N335 351 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 MYCBPAPQ8TBZ2 947 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 TCP11X1B4DZS4 312 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 TLR3O15455 904 aaKnown RBP18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 MYBL1P10243 752 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 MYBL2P10244 700 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 GNA15P30679 374 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 IZUMO3Q5VZ72 239 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 SWSAP1Q6NVH7 229 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 SDCCAG8Q86SQ7 713 aaPredicted RBP18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 COMMD10Q9Y6G5 202 aa18.28■□□□□ 0.52
SMARCA4-215ENST00000590574 BAG2O95816 211 aa18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 IRF2BP1Q8IU81 584 aa18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 TSEN2Q8NCE0 465 aaKnown RBP18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 KIAA1586Q9HCI6 787 aa18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 OSGEPQ9NPF4 335 aa18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 AIPL1Q9NZN9 384 aa18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 RHOT1Q8IXI2 618 aa18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 CFAP61Q8NHU2 1237 aa18.27■□□□□ 0.52
SMARCA4-215ENST00000590574 FGRP09769 529 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 RNASELQ05823 741 aaKnown RBP18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 RCN2Q14257 317 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 RNF34Q969K3 372 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 SLC29A2Q14542 456 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 TAF11Q15544 211 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 GRIK5Q16478 980 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 PPP4R1Q8TF05 950 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 CPA5Q8WXQ8 436 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 MIS12Q9H081 205 aa18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 NOP53Q9NZM5 478 aaKnown RBP18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.27■□□□□ 0.51
SMARCA4-215ENST00000590574 MED7O43513 233 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 LDHAP00338 332 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 SRGAP2CP0DJJ0 459 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 KCNJ1P48048 391 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 SNRNP35Q16560 246 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 CFAP36Q96G28 342 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 SEPT10Q9P0V9 454 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 UVRAGQ9P2Y5 699 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 SPAG7O75391 227 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 HNRNPH1P31943 449 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 TFDP1Q14186 410 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 PHLDB3Q6NSJ2 640 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 MOXD1Q6UVY6 613 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 PRPF38AQ8NAV1 312 aaKnown RBP18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 HSPH1Q92598 858 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 POLR3FQ9H1D9 316 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 CARD9Q9H257 536 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 IL1R1P14778 569 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 EEPD1Q7L9B9 569 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 KDM3BQ7LBC6 1761 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 FOXN3O00409 490 aaPredicted RBP18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 GPS1Q13098 491 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 MAP7D1Q3KQU3 841 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 GADL1Q6ZQY3 521 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 PDIK1LQ8N165 341 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 HESX1Q9UBX0 185 aa18.26■□□□□ 0.51
SMARCA4-215ENST00000590574 PEX19P40855 299 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 ENOSF1Q7L5Y1 443 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 TRIM50Q86XT4 487 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 C18orf8Q96DM3 657 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 UNC45AQ9H3U1 944 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 GDF3Q9NR23 364 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 DCTN3O75935 186 aa18.25■□□□□ 0.51
SMARCA4-215ENST00000590574 TRMT10CQ7L0Y3 403 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms