RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 SIGLEC14Q08ET2 396 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 HYAL1Q12794 435 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 LRP8Q14114 963 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 MVPQ14764 893 aaKnown RBP9.26□□□□□ -0.93
SMAD4-209ENST00000589941 CPSF6Q16630 551 aaKnown RBP eCLIP9.26□□□□□ -0.93
SMAD4-209ENST00000589941 SNRNP48Q6IEG0 339 aaKnown RBP9.26□□□□□ -0.93
SMAD4-209ENST00000589941 ATF7IPQ6VMQ6 1270 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 NOL8Q76FK4 1167 aaKnown RBP9.26□□□□□ -0.93
SMAD4-209ENST00000589941 TMEM105Q8N8V8 129 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 NKD2Q969F2 451 aaPredicted RBP9.26□□□□□ -0.93
SMAD4-209ENST00000589941 TMEM87BQ96K49 555 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 SPON2Q9BUD6 331 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 VCPKMTQ9H867 229 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 BRMS1Q9HCU9 246 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 CABP5Q9NP86 173 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 PDGFCQ9NRA1 345 aa9.26□□□□□ -0.93
SMAD4-209ENST00000589941 ZZEF1O43149 2961 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 OTOGLQ3ZCN5 2332 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 FASNP49327 2511 aaKnown RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 UPK3BL1B0FP48 263 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 LOC730098B7Z3J9 87 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 UPK3BL2E5RIL1 263 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 WDR46O15213 610 aaKnown RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 EOMESO95936 686 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 CST3P01034 146 aaPredicted RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 GABPAQ06546 454 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 PDE4BQ07343 736 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 SMAD4Q13485 552 aaKnown RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 ST3GAL2Q16842 350 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 CYP27C1Q4G0S4 372 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 EPC2Q52LR7 807 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 ARTNQ5T4W7 220 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 MRPL41Q8IXM3 137 aaKnown RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 FAM133AQ8N9E0 248 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 FAM181AQ8N9Y4 354 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 RIN3Q8TB24 985 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 HEXIM2Q96MH2 286 aaKnown RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 CTAGE1Q96RT6 745 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 RAD9AQ99638 391 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 NSUN3Q9H649 340 aaKnown RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 PIH1D3Q9NQM4 214 aaKnown RBP9.25□□□□□ -0.93
SMAD4-209ENST00000589941 REV1Q9UBZ9 1251 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 ADAM30Q9UKF2 790 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 MYO10Q9HD67 2058 aa9.25□□□□□ -0.93
SMAD4-209ENST00000589941 DNAJA2O60884 412 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 NBNO60934 754 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 HTR3BO95264 441 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 CYP2D6P10635 497 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 AKR1B1P15121 316 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 ICA1Q05084 483 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 MSMPQ1L6U9 139 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 FAM83BQ5T0W9 1011 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 MCATQ8IVS2 390 aaKnown RBP9.24□□□□□ -0.93
SMAD4-209ENST00000589941 FBXO16Q8IX29 292 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-209ENST00000589941 TRMT2AQ8IZ69 625 aaKnown RBP9.24□□□□□ -0.93
SMAD4-209ENST00000589941 Q8N3U1 123 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 DDX11Q96FC9 970 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 NEUROD6Q96NK8 337 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 NUP88Q99567 741 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-209ENST00000589941 MIPEPQ99797 713 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 NT5C1AQ9BXI3 368 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 IRF2BPLQ9H1B7 796 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 ZC3H7BQ9UGR2 993 aaKnown RBP9.24□□□□□ -0.93
SMAD4-209ENST00000589941 MYH7BA7E2Y1 1941 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 ZFYVE26Q68DK2 2539 aa9.24□□□□□ -0.93
SMAD4-209ENST00000589941 MYH7P12883 1935 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 GCN1Q92616 2671 aaKnown RBP9.23□□□□□ -0.93
SMAD4-209ENST00000589941 SPINK2P20155 84 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 GRIK1P39086 918 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 PURAQ00577 322 aaKnown RBP9.23□□□□□ -0.93
SMAD4-209ENST00000589941 GPM6BQ13491 265 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 CBX2Q14781 532 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-209ENST00000589941 PTPROQ16827 1216 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 SEZ6Q53EL9 994 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 FAM47CQ5HY64 1035 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 TMEM201Q5SNT2 666 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 SLC6A19Q695T7 634 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.23□□□□□ -0.935e-7■■■□□ 18.5
SMAD4-209ENST00000589941 KIAA2013Q8IYS2 634 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 MAGEB6Q8N7X4 407 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 DHX38Q92620 1227 aaKnown RBP9.23□□□□□ -0.93
SMAD4-209ENST00000589941 TEX13BQ9BXU2 312 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
SMAD4-209ENST00000589941 KIAA1324LA8MWY0 1029 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-209ENST00000589941 CHURC1-FNTBB4DL54 471 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 H3BNC9 293 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 APOBRQ0VD83 1088 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 EEPD1Q7L9B9 569 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 MFSD2AQ8NA29 543 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 NKD1Q969G9 470 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 DYNLL2Q96FJ2 89 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 MSLNLQ96KJ4 702 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 CRBNQ96SW2 442 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 AP5M1Q9H0R1 490 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 SMOC2Q9H3U7 446 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 INCENPQ9NQS7 918 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 PCMTD2Q9NV79 361 aa9.22□□□□□ -0.93
SMAD4-209ENST00000589941 CD207Q9UJ71 328 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms