RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 HK3P52790 923 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 GP2P55259 537 aaKnown RBP6.74□□□□□ -1.33
TUBD1-208ENST00000588009 RAB1AP62820 205 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 ZNF200P98182 395 aaPredicted RBP6.74□□□□□ -1.33
TUBD1-208ENST00000588009 CD69Q07108 199 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 PHF19Q5T6S3 580 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 GRAMD4Q6IC98 578 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 FAM129CQ86XR2 697 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.74□□□□□ -1.33
TUBD1-208ENST00000588009 DEPTORQ8TB45 409 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 PHKBQ93100 1093 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 APIPQ96GX9 242 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 RIPOR3Q96MK2 946 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 HERPUD2Q9BSE4 406 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 SELENOOQ9BVL4 669 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 C22orf23Q9BZE7 217 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 OSBPL6Q9BZF3 934 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 UBA5Q9GZZ9 404 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 TRMT13Q9NUP7 481 aaKnown RBP6.74□□□□□ -1.33
TUBD1-208ENST00000588009 ZFP69BQ9UJL9 534 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 RPTORQ8N122 1335 aa6.74□□□□□ -1.33
TUBD1-208ENST00000588009 LRRC14BA6NHZ5 514 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 HALP42357 657 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 MEF2AQ02078 507 aaPredicted RBP6.73□□□□□ -1.33
TUBD1-208ENST00000588009 BTKQ06187 659 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 NOGQ13253 232 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 FGL2Q14314 439 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 WDR72Q3MJ13 1102 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 OLFML2BQ68BL8 750 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 IRF2BP1Q8IU81 584 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 STPG3Q8N7X2 389 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 ANKRD42Q8N9B4 389 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 C3orf20Q8ND61 904 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 HOXB13Q92826 284 aaPredicted RBP6.73□□□□□ -1.33
TUBD1-208ENST00000588009 NT5C1BQ96P26 610 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 DMRTA2Q96SC8 542 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 SYT3Q9BQG1 590 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.73□□□□□ -1.33
TUBD1-208ENST00000588009 BTBD1Q9H0C5 482 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 ARMT1Q9H993 441 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 ATP6V0A4Q9HBG4 840 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 KCND1Q9NSA2 647 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 POLR3BQ9NW08 1133 aaPredicted RBP6.73□□□□□ -1.33
TUBD1-208ENST00000588009 SAE1Q9UBE0 346 aaPredicted RBP6.73□□□□□ -1.33
TUBD1-208ENST00000588009 TPCN1Q9ULQ1 816 aa6.73□□□□□ -1.33
TUBD1-208ENST00000588009 RHPN2P1A8MT19 583 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 HRKO00198 91 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 N4BP3O15049 544 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 FRS3O43559 492 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 SH3BP5O60239 455 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 ENDOD1O94919 500 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 LY86O95711 162 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 LTA4HP09960 611 aaKnown RBP6.72□□□□□ -1.33
TUBD1-208ENST00000588009 CYP2C8P10632 490 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 ADSLP30566 484 aaPredicted RBP6.72□□□□□ -1.33
TUBD1-208ENST00000588009 VIPR1P32241 457 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 NKX6-1P78426 367 aaPredicted RBP6.72□□□□□ -1.33
TUBD1-208ENST00000588009 MAN2A1Q16706 1144 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 GJC2Q5T442 439 aaPredicted RBP6.72□□□□□ -1.33
TUBD1-208ENST00000588009 ABHD15Q6UXT9 468 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 BCL6BQ8N143 479 aaPredicted RBP6.72□□□□□ -1.33
TUBD1-208ENST00000588009 OR2C3Q8N628 320 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 POF1BQ8WVV4 589 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 CLPTM1LQ96KA5 538 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 FMNL2Q96PY5 1086 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 LRRC27Q9C0I9 530 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 ZMAT3Q9HA38 289 aaKnown RBP6.72□□□□□ -1.33
TUBD1-208ENST00000588009 PRDM16Q9HAZ2 1276 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 PCDH18Q9HCL0 1135 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 EPB41L4AQ9HCS5 686 aaPredicted RBP6.72□□□□□ -1.33
TUBD1-208ENST00000588009 LMBRD1Q9NUN5 540 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 TDP1Q9NUW8 608 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 DNAI1Q9UI46 699 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 PCDHA3Q9Y5H8 950 aa6.72□□□□□ -1.33
TUBD1-208ENST00000588009 H3BUI4 141 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 PIP5K1CO60331 668 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 NBNO60934 754 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 PHF2O75151 1096 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 FSBPO95073 299 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 TYRP1P17643 537 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 SLC6A9P48067 706 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 CASP5P51878 434 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 CDC42EP1Q00587 391 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 ADAM9Q13443 819 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 UBE3CQ15386 1083 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 TMEM200BQ69YZ2 307 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 Q6ZVL8 140 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 HEATR3Q7Z4Q2 680 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 MYLK4Q86YV6 388 aaPredicted RBP6.71□□□□□ -1.34
TUBD1-208ENST00000588009 SNX33Q8WV41 574 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 FAM167AQ96KS9 214 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 WDR92Q96MX6 357 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 ZNF552Q9H707 407 aaPredicted RBP6.71□□□□□ -1.34
TUBD1-208ENST00000588009 STAP2Q9UGK3 403 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 SIK3Q9Y2K2 1263 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 IRS2Q9Y4H2 1338 aa6.71□□□□□ -1.34
TUBD1-208ENST00000588009 A0A0G2JNJ9 132 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 TBX3O15119 743 aa6.7□□□□□ -1.34
TUBD1-208ENST00000588009 KPNA5O15131 536 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms