RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 KMT5AQ9NQR1 393 aa14.66□□□□□ -0.06
SMARCA4-210ENST00000586892 LARSQ9P2J5 1176 aaKnown RBP14.66□□□□□ -0.06
SMARCA4-210ENST00000586892 ARHGAP28Q9P2N2 729 aa14.66□□□□□ -0.06
SMARCA4-210ENST00000586892 HCSTQ9UBK5 93 aa14.66□□□□□ -0.06
SMARCA4-210ENST00000586892 STK17AQ9UEE5 414 aa14.66□□□□□ -0.06
SMARCA4-210ENST00000586892 CFAP45Q9UL16 551 aa14.66□□□□□ -0.06
SMARCA4-210ENST00000586892 LIG1P18858 919 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 SMTNP53814 917 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 MCM6Q14566 821 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 SKIV2LQ15477 1246 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 TMEM132AQ24JP5 1023 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 KCNT2Q6UVM3 1135 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 CCDC73Q6ZRK6 1079 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 THNSL1Q8IYQ7 743 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 SPPL3Q8TCT6 385 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 KCNG4Q8TDN1 519 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 ZNF558Q96NG5 402 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 ADPGKQ9BRR6 497 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 TMEM134Q9H6X4 195 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 TBC1D13Q9NVG8 400 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 KANSL3Q9P2N6 904 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 INPP5FQ9Y2H2 1132 aa14.65□□□□□ -0.06
SMARCA4-210ENST00000586892 ZMYM2Q9UBW7 1377 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 TTLL13PA6NNM8 815 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 SFI1A8K8P3 1242 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 INPPL1O15357 1258 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 FGF18O76093 207 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 NPTXRO95502 500 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 BRD1O95696 1058 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 KRT18P05783 430 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 ALDH7A1P49419 539 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 RNASELQ05823 741 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 DHX8Q14562 1220 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 FOXD4L6Q3SYB3 417 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 RRAGBQ5VZM2 374 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 FOXD4L3Q6VB84 417 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 APBB1IPQ7Z5R6 666 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 CDR2LQ86X02 465 aaPredicted RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 POF1BQ8WVV4 589 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 REEP2Q9BRK0 252 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 NXF3Q9H4D5 531 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 PDZD7Q9H5P4 517 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 NSUN3Q9H649 340 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 THEGQ9P2T0 379 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 LZTS1Q9Y250 596 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 GIT1Q9Y2X7 761 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 HES2Q9Y543 173 aa14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 TDRD15B5MCY1 1934 aaKnown RBP14.64□□□□□ -0.07
SMARCA4-210ENST00000586892 NPHP3-ACAD11A0A0J9YXS1 232 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 ARL5CA6NH57 179 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 H0YCG3 227 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 SLC16A4O15374 487 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 CUTAO60888 179 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 ZC3H11AO75152 810 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 EDN1P05305 212 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 SCP2P22307 547 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 ZNF131P52739 623 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 BCAR1P56945 870 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 PLCB3Q01970 1234 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 CACNB1Q02641 598 aaPredicted RBP14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 CAMK1Q14012 370 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 DCAF4L1Q3SXM0 396 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 ATF7IP2Q5U623 682 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 TMEM161BQ8NDZ6 487 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 MRPL4Q9BYD3 311 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 RNF39Q9H2S5 420 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 PARVGQ9HBI0 331 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 SPG21Q9NZD8 308 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 PUF60Q9UHX1 559 aaKnown RBP14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 COG5Q9UP83 839 aa14.63□□□□□ -0.07
SMARCA4-210ENST00000586892 TBCAO75347 108 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 FAM13AO94988 1023 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 DNAJB1P25685 340 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 PBX3P40426 434 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 MLH1P40692 756 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 STAT6P42226 847 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 NCKAP1LP55160 1127 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 KRT17Q04695 432 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 DNM1Q05193 864 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 STRN3Q13033 797 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 GIT2Q14161 759 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 NT5DC1Q5TFE4 455 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 SV2BQ7L1I2 683 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 TAS1R3Q7RTX0 852 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 ATXN2LQ8WWM7 1075 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 MRPS27Q92552 414 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 KCNN1Q92952 543 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 PPP2R3CQ969Q6 453 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 FAM193BQ96PV7 902 aaPredicted RBP14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 GAD1Q99259 594 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 ACO2Q99798 780 aaKnown RBP14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 APOL6Q9BWW8 343 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 NRDE2Q9H7Z3 1164 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 PRDM6Q9NQX0 595 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 TLR9Q9NR96 1032 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 TNFSF13BQ9Y275 285 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 ATP6V1DQ9Y5K8 247 aa14.62□□□□□ -0.07
SMARCA4-210ENST00000586892 NCK2O43639 380 aa14.61□□□□□ -0.07
SMARCA4-210ENST00000586892 POMCP01189 267 aa14.61□□□□□ -0.07
SMARCA4-210ENST00000586892 MAPTP10636 758 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms