RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 ARL2P36404 184 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 ZNF131P52739 623 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 POU5F1BQ06416 359 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 PSMD2Q13200 908 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 PAN2Q504Q3 1202 aaKnown RBP17.73■□□□□ 0.43
ATG4D-205ENST00000586477 SLC24A5Q71RS6 500 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 ZNF410Q86VK4 478 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 STAMQ92783 540 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 MRPL38Q96DV4 380 aaKnown RBP17.73■□□□□ 0.43
ATG4D-205ENST00000586477 FDXACB1Q9BRP7 624 aaPredicted RBP17.73■□□□□ 0.43
ATG4D-205ENST00000586477 ZHX3Q9H4I2 956 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 EXOC1Q9NV70 894 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 PANK4Q9NVE7 773 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 HCSTQ9UBK5 93 aa17.73■□□□□ 0.43
ATG4D-205ENST00000586477 FRMD3A2A2Y4 597 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 DENND3A2RUS2 1198 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 GRM6O15303 877 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 RPN1P04843 607 aaKnown RBP17.72■□□□□ 0.43
ATG4D-205ENST00000586477 STAG3L1P0CL83 205 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 MAPTP10636 758 aaKnown RBP17.72■□□□□ 0.43
ATG4D-205ENST00000586477 IBSPP21815 317 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-205ENST00000586477 NAMPTP43490 491 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 DPYDQ12882 1025 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 CUL4BQ13620 913 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 ALCAMQ13740 583 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 CAMK1Q14012 370 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 KCNB1Q14721 858 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 ODR4Q5SWX8 454 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 FAM43BQ6ZT52 329 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-205ENST00000586477 MAEAQ7L5Y9 396 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 MYCT1Q8N699 235 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 TRIML1Q8N9V2 468 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 SPIRE2Q8WWL2 714 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 NLRP7Q8WX94 980 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 TMEM143Q96AN5 459 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 DNAJC19Q96DA6 116 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 UHRF1Q96T88 793 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-205ENST00000586477 INO80BQ9C086 356 aaPredicted RBP17.72■□□□□ 0.43
ATG4D-205ENST00000586477 C2orf40Q9H1Z8 148 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 OLFML3Q9NRN5 406 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 C1orf112Q9NSG2 853 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 COG5Q9UP83 839 aa17.72■□□□□ 0.43
ATG4D-205ENST00000586477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-205ENST00000586477 KIF20AO95235 890 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 RB1P06400 928 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 FGFR1P11362 822 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 ATF7P17544 494 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-205ENST00000586477 DNAJB1P25685 340 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 PHKA2P46019 1235 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 KCNQ1P51787 676 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 EFNA5P52803 228 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 RAD51AP2Q09MP3 1159 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 PNOCQ13519 176 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 PCBP1Q15365 356 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATG4D-205ENST00000586477 CAMK4Q16566 473 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 HERC4Q5GLZ8 1057 aaPredicted RBP17.71■□□□□ 0.43
ATG4D-205ENST00000586477 RHPN2Q8IUC4 686 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 ZBTB8OSQ8IWT0 167 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 FAM178BQ8IXR5 827 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 DEPTORQ8TB45 409 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 PRPF31Q8WWY3 499 aaKnown RBP17.71■□□□□ 0.43
ATG4D-205ENST00000586477 SCLT1Q96NL6 688 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 NFKBIZQ9BYH8 718 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 BLZF1Q9H2G9 400 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 IFT122Q9HBG6 1241 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 KIAA1468Q9P260 1216 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 PCDHB7Q9Y5E2 793 aa17.71■□□□□ 0.43
ATG4D-205ENST00000586477 BMP1P13497 986 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 PPP1R2P41236 205 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 LAMTOR4Q0VGL1 99 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 COASYQ13057 564 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 MAPK7Q13164 816 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 NT5DC1Q5TFE4 455 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 CAVIN1Q6NZI2 390 aaKnown RBP17.7■□□□□ 0.42
ATG4D-205ENST00000586477 ZNF598Q86UK7 904 aaKnown RBP17.7■□□□□ 0.42
ATG4D-205ENST00000586477 GRAMD1CQ8IYS0 662 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 SPATA20Q8TB22 786 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 HLA-CQ95604 372 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 NTPCRQ9BSD7 190 aaKnown RBP17.7■□□□□ 0.42
ATG4D-205ENST00000586477 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 ELAC1Q9H777 363 aaKnown RBP17.7■□□□□ 0.42
ATG4D-205ENST00000586477 KMT5AQ9NQR1 393 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 TMEM161AQ9NX61 479 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 LRFN2Q9ULH4 789 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 MYH11P35749 1972 aa17.7■□□□□ 0.42
ATG4D-205ENST00000586477 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.69■□□□□ 0.42
ATG4D-205ENST00000586477 NPHP3-ACAD11A0A0J9YXS1 232 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 LRRIQ4A6NIV6 560 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 CCDC169A6NNP5 214 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 RHOBTB3O94955 611 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 ITGB1P05556 798 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 GLRA2P23416 452 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 PEX3P56589 373 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 FAM26FQ5R3K3 315 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 LRRC55Q6ZSA7 311 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 ECHDC2Q86YB7 292 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 DAW1Q8N136 415 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 HVCN1Q96D96 273 aa17.69■□□□□ 0.42
ATG4D-205ENST00000586477 GCOM2Q9BZD3 368 aaPredicted RBP17.69■□□□□ 0.42
ATG4D-205ENST00000586477 CWH43Q9H720 699 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms