RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 XXYLT1Q8NBI6 393 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 ZSWIM2Q8NEG5 633 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 MTG1Q9BT17 334 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-204ENST00000586417 PLAGL2Q9UPG8 496 aa22.29■■□□□ 1.16
ATG4D-204ENST00000586417 TRIP12Q14669 1992 aaPredicted RBP22.29■■□□□ 1.16
ATG4D-204ENST00000586417 EVPLQ92817 2033 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 IGKV6-21A0A0C4DH24 114 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 ACLYP53396 1101 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 APBA1Q02410 837 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 BFSP1Q12934 665 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 DRP2Q13474 957 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 HIC1Q14526 733 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 TSR1Q2NL82 804 aaKnown RBP22.28■■□□□ 1.16
ATG4D-204ENST00000586417 PCSK9Q8NBP7 692 aaKnown RBP22.28■■□□□ 1.16
ATG4D-204ENST00000586417 GANQ9H2C0 597 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 CEP72Q9P209 647 aa22.28■■□□□ 1.16
ATG4D-204ENST00000586417 GTPBP10A4D1E9 387 aaKnown RBP22.27■■□□□ 1.16
ATG4D-204ENST00000586417 MAPK13O15264 365 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 SMIM10L2AP0DMW4 78 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 SMIM10L2BP0DMW5 78 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 ABCD1P33897 745 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 CDK17Q00537 523 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 PLCB1Q9NQ66 1216 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 SETD4Q9NVD3 440 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 OGDHLQ9ULD0 1010 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 CCDC175P0C221 793 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 SCP2P22307 547 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 MCCD1P59942 119 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-204ENST00000586417 PPFIA1Q13136 1202 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 MKRN4PQ13434 485 aaPredicted RBP22.27■■□□□ 1.16
ATG4D-204ENST00000586417 EXOC3L4Q17RC7 722 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 PDXDC1Q6P996 788 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 RDH13Q8NBN7 331 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 ARRDC4Q8NCT1 418 aa22.27■■□□□ 1.16
ATG4D-204ENST00000586417 MKI67P46013 3256 aaKnown RBP22.27■■□□□ 1.15
ATG4D-204ENST00000586417 GRIN2DO15399 1336 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 LRRC53A6NM62 1247 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 TRIM49P0CI25 452 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 TRIM49CP0CI26 452 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 SLC9A1P19634 815 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 PON1P27169 355 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 FMO5P49326 533 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 CAPSQ13938 189 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 GRIK4Q16099 956 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 NBPF20Q3BBV1 942 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 MARCH8Q5T0T0 291 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 INTS8Q75QN2 995 aaKnown RBP22.26■■□□□ 1.15
ATG4D-204ENST00000586417 RRAGAQ7L523 313 aa22.26■■□□□ 1.15
ATG4D-204ENST00000586417 U2AF1L4Q8WU68 220 aaKnown RBP22.26■■□□□ 1.15
ATG4D-204ENST00000586417 GAS2O43903 313 aaKnown RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 GJB1P08034 283 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 ZNF484Q5JVG2 852 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 GBP6Q6ZN66 633 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 ACRBPQ8NEB7 543 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 LMBR1Q8WVP7 490 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 KATNAL1Q9BW62 490 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 SIX2Q9NPC8 291 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 ZNHIT6Q9NWK9 470 aaKnown RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 HDAC6Q9UBN7 1215 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 EPN1Q9Y6I3 576 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 LRRIQ4A6NIV6 560 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 NDUFA10O95299 355 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 SGPL1O95470 568 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 ADRB2P07550 413 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 ACTN1P12814 892 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 POLR2FP61218 127 aaKnown RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 ZNF200P98182 395 aaPredicted RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 CBWD6Q4V339 395 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 CBWD3Q5JTY5 395 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 CBWD5Q5RIA9 395 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 C1orf220Q5T0J3 134 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 IER5Q5VY09 327 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 CACNA2D4Q7Z3S7 1137 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 EXOC8Q8IYI6 725 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 PLEKHO2Q8TD55 490 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 PRPF31Q8WWY3 499 aaKnown RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 FBXL18Q96ME1 805 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 TSEN34Q9BSV6 310 aaKnown RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 CRISPLD2Q9H0B8 497 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 NLRC4Q9NPP4 1024 aa22.25■■□□□ 1.15
ATG4D-204ENST00000586417 R3HCC1Q9Y3T6 440 aaKnown RBP22.25■■□□□ 1.15
ATG4D-204ENST00000586417 A0A1W2PQ45 241 aaPredicted RBP22.24■■□□□ 1.15
ATG4D-204ENST00000586417 A0A1W2PQY0 241 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 GOLGA6L9A6NEM1 432 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 HNRNPDLO14979 420 aaKnown RBP22.24■■□□□ 1.15
ATG4D-204ENST00000586417 PIGRP01833 764 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 KLRC1P26715 233 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 DLG4P78352 724 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 KLHDC7AQ5VTJ3 777 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 DEPTORQ8TB45 409 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 VTI1AQ96AJ9 217 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 GCNT4Q9P109 453 aa22.24■■□□□ 1.15
ATG4D-204ENST00000586417 REXO2Q9Y3B8 237 aaKnown RBP22.24■■□□□ 1.15
ATG4D-204ENST00000586417 GOLGA8IPA6NC78 632 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 MOXD2PA6NHM9 499 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 GOLGA8JA6NMD2 632 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 KIF2AO00139 706 aaPredicted RBP22.23■■□□□ 1.15
ATG4D-204ENST00000586417 C22orf31O95567 290 aa22.23■■□□□ 1.15
ATG4D-204ENST00000586417 TFRCP02786 760 aaKnown RBP22.23■■□□□ 1.15
ATG4D-204ENST00000586417 KRT13P13646 458 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms