RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 CCDC73Q6ZRK6 1079 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 TAS1R3Q7RTX0 852 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 KLHL23Q8NBE8 558 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 COLGALT1Q8NBJ5 622 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 PDZD7Q9H5P4 517 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 RSAD1Q9HA92 442 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 KMT5AQ9NQR1 393 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 LARSQ9P2J5 1176 aaKnown RBP17.91■□□□□ 0.46
ERBB2-222ENST00000584908 PCDHB12Q9Y5F1 795 aa17.91■□□□□ 0.46
ERBB2-222ENST00000584908 A0A087X0B3 334 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 NPHP3-ACAD11A0A0J9YXS1 232 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 CARNS1A5YM72 827 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 SFI1A8K8P3 1242 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 GRM6O15303 877 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 ITGA4P13612 1032 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 SCP2P22307 547 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 SMTNP53814 917 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 CAMK1Q14012 370 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 NT5DC1Q5TFE4 455 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 TMEM161BQ8NDZ6 487 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 SPPL3Q8TCT6 385 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 RNF39Q9H2S5 420 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 TBC1D13Q9NVG8 400 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 KANSL3Q9P2N6 904 aa17.9■□□□□ 0.46
ERBB2-222ENST00000584908 NPTXRO95502 500 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 NCKAP1LP55160 1127 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 PLCB3Q01970 1234 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 UBE3AQ05086 875 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 DHX8Q14562 1220 aaKnown RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 FOXD4L6Q3SYB3 417 aaPredicted RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 LONRF3Q496Y0 759 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 SPOUT1Q5T280 376 aaKnown RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 SHC4Q6S5L8 630 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 KCNT2Q6UVM3 1135 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 FOXD4L3Q6VB84 417 aaPredicted RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 CDR2LQ86X02 465 aaPredicted RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 HACE1Q8IYU2 909 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 TRIM6Q9C030 488 aaPredicted RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 NXF3Q9H4D5 531 aaKnown RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 ALG13Q9NP73 1137 aaKnown RBP17.89■□□□□ 0.45
ERBB2-222ENST00000584908 PCDHA7Q9UN72 937 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 TNFSF13BQ9Y275 285 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 GIT1Q9Y2X7 761 aa17.89■□□□□ 0.45
ERBB2-222ENST00000584908 H0YCG3 227 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 SLC16A4O15374 487 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 MAPTP10636 758 aaKnown RBP17.88■□□□□ 0.45
ERBB2-222ENST00000584908 PPM1AP35813 382 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
ERBB2-222ENST00000584908 CCDC85BQ15834 202 aaPredicted RBP17.88■□□□□ 0.45
ERBB2-222ENST00000584908 E2F4Q16254 413 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 TIGD5Q53EQ6 642 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 ATF7IP2Q5U623 682 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 SV2BQ7L1I2 683 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 URGCPQ8TCY9 931 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 ZNF558Q96NG5 402 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 ACO2Q99798 780 aaKnown RBP17.88■□□□□ 0.45
ERBB2-222ENST00000584908 ADPGKQ9BRR6 497 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 PARVGQ9HBI0 331 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 PTPRHQ9HD43 1115 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 LZTS1Q9Y250 596 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 HES2Q9Y543 173 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 ATP6V1DQ9Y5K8 247 aa17.88■□□□□ 0.45
ERBB2-222ENST00000584908 TRIP11Q15643 1979 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 XIRP2A4UGR9 3374 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 ARL5CA6NH57 179 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 FGF18O76093 207 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 PROZP22891 400 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 DNAJB1P25685 340 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 STAT6P42226 847 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 AFF1P51825 1210 aaKnown RBP17.87■□□□□ 0.45
ERBB2-222ENST00000584908 DCAF4L1Q3SXM0 396 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 EEF1DP3Q658K8 133 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 SLC39A11Q8N1S5 342 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 DNAJC19Q96DA6 116 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 FIZ1Q96SL8 496 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 MRPL4Q9BYD3 311 aaKnown RBP17.87■□□□□ 0.45
ERBB2-222ENST00000584908 CUEDC2Q9H467 287 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 NRDE2Q9H7Z3 1164 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 USP20Q9Y2K6 914 aa17.87■□□□□ 0.45
ERBB2-222ENST00000584908 MYMKA6NI61 221 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 ABLIM1O14639 778 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 FAM13AO94988 1023 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 LIG1P18858 919 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 ME1P48163 572 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 BCAR1P56945 870 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 KRT85P78386 507 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 COL19A1Q14993 1142 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 RESP18Q5W5W9 173 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 HAUS6Q7Z4H7 955 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 THNSL1Q8IYQ7 743 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 MICALL1Q8N3F8 863 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 GSTCDQ8NEC7 633 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 PPM1EQ8WY54 764 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 DDX12PQ92771 950 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 ST6GALNAC4Q9H4F1 302 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 NSUN3Q9H649 340 aaKnown RBP17.86■□□□□ 0.45
ERBB2-222ENST00000584908 SPG21Q9NZD8 308 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 CITO14578 2027 aa17.86■□□□□ 0.45
ERBB2-222ENST00000584908 TRAK2O60296 914 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms