RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 EXOC7Q9UPT5 735 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 MKI67P46013 3256 aaKnown RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 BECN2A8MW95 431 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 HNRNPDLO14979 420 aaKnown RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 KIF20AO95235 890 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 CXCL10P02778 98 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 EDN1P05305 212 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 ZSCAN20P17040 1043 aaPredicted RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 ARF4P18085 180 aaPredicted RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 IBSPP21815 317 aaPredicted RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 MATR3P43243 847 aaKnown RBP eCLIP12□□□□□ -0.49
TOP3A-216ENST00000583804 LIG4P49917 911 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 CCDC173Q0VFZ6 552 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 PAK1Q13153 545 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.491e-7■■■■□ 21.2
TOP3A-216ENST00000583804 STIM1Q13586 685 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 ATF7IP2Q5U623 682 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 CDR2LQ86X02 465 aaPredicted RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 MAP4K3Q8IVH8 894 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 MLKLQ8NB16 471 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 MED15Q96RN5 788 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 NAT10Q9H0A0 1025 aaKnown RBP12□□□□□ -0.49
TOP3A-216ENST00000583804 TMEM206Q9H813 350 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 IL23AQ9NPF7 189 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 DACH1Q9UI36 760 aa12□□□□□ -0.49
TOP3A-216ENST00000583804 UBE4BO95155 1302 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 CNTNAP2Q9UHC6 1331 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 PDE4DIPQ5VU43 2346 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 GOLGA6L19H0YKK7 550 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 HARSP12081 509 aaKnown RBP11.99□□□□□ -0.49
TOP3A-216ENST00000583804 HOXA11P31270 313 aaPredicted RBP11.99□□□□□ -0.49
TOP3A-216ENST00000583804 HOXD13P35453 343 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 IQCB1Q15051 598 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 TPD52L1Q16890 204 aaPredicted RBP11.99□□□□□ -0.49
TOP3A-216ENST00000583804 KNOP1Q1ED39 458 aaKnown RBP11.99□□□□□ -0.49
TOP3A-216ENST00000583804 BMT2Q1RMZ1 405 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 NOTUMQ6P988 496 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 ZPBP2Q6X784 338 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 CREBRFQ8IUR6 639 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 ADSSL1Q8N142 457 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 GUF1Q8N442 669 aaKnown RBP11.99□□□□□ -0.49
TOP3A-216ENST00000583804 KCNN1Q92952 543 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 ACO2Q99798 780 aaKnown RBP11.99□□□□□ -0.49
TOP3A-216ENST00000583804 ADAM2Q99965 735 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 TMX1Q9H3N1 280 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 CHST12Q9NRB3 414 aa11.99□□□□□ -0.49
TOP3A-216ENST00000583804 A0A1B0GUA9 196 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 ANKRD63C9JTQ0 380 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 N4BP3O15049 544 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 PFKMP08237 780 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 ACTN1P12814 892 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 AXLP30530 894 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 IKBKEQ14164 716 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 TCTN1Q2MV58 587 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 EEF1DP3Q658K8 133 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 CNKSR3Q6P9H4 555 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 ZBTB33Q86T24 672 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
TOP3A-216ENST00000583804 APBB2Q92870 758 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 ZBTB45Q96K62 511 aaPredicted RBP11.98□□□□□ -0.49
TOP3A-216ENST00000583804 ADPGKQ9BRR6 497 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 FTHL17Q9BXU8 183 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 GBP3Q9H0R5 595 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 SEMA6BQ9H3T3 888 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 PDZD7Q9H5P4 517 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 RTN4Q9NQC3 1192 aaKnown RBP11.98□□□□□ -0.49
TOP3A-216ENST00000583804 ANKFY1Q9P2R3 1169 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 TNFSF13BQ9Y275 285 aa11.98□□□□□ -0.49
TOP3A-216ENST00000583804 TISP43B9A030 160 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 H0YGN5 161 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 PSMA7O14818 248 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 CLDN3O15551 220 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 MGEA5O60502 916 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 TOM1L1O75674 476 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 NPTXRO95502 500 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 FGBP02675 491 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 PPP1R2P41236 205 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 EPHB4P54760 987 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 MYL5Q02045 173 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 DSC3Q14574 896 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 ZNF568Q3ZCX4 644 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 SLC39A4Q6P5W5 647 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 ZNF365Q70YC5 407 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 C16orf59Q7L2K0 433 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 HS2ST1Q7LGA3 356 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 OTOP2Q7RTS6 562 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 APBB1IPQ7Z5R6 666 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-216ENST00000583804 POMGNT1Q8WZA1 660 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 P2RX5Q93086 422 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 VWCEQ96DN2 955 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 CCDC51Q96ER9 411 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 DHTKD1Q96HY7 919 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-216ENST00000583804 TRIM6Q9C030 488 aaPredicted RBP11.97□□□□□ -0.49
TOP3A-216ENST00000583804 FANCLQ9NW38 375 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 NFE2L3Q9Y4A8 694 aa11.97□□□□□ -0.49
TOP3A-216ENST00000583804 SIP14410 1827 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms