RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 C2orf71A6NGG8 1288 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 CDC25AP30304 524 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 ALDH7A1P49419 539 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 NDUFV1P49821 464 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 DSC1Q08554 894 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 RILPL1Q5EBL4 403 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 KCNK18Q7Z418 384 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 DDX53Q86TM3 631 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 CDR2LQ86X02 465 aaPredicted RBP11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 ADHFE1Q8IWW8 467 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 DAW1Q8N136 415 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 GJD3Q8N144 294 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 SNX29Q8TEQ0 813 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 SUSD6Q92537 303 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 PRIMPOLQ96LW4 560 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 ZFP42Q96MM3 310 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 CCDC43Q96MW1 224 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 BHMT2Q9H2M3 363 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 NXF3Q9H4D5 531 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 ENTPD7Q9NQZ7 604 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 DDX19AQ9NUU7 478 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 MIOSQ9NXC5 875 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 ZMYM2Q9UBW7 1377 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 PUF60Q9UHX1 559 aaKnown RBP11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 KIAA1024Q9UPX6 916 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 IRAK3Q9Y616 596 aa11.73□□□□□ -0.53
SUPT4H1-204ENST00000580947 ARHGEF35A5YM69 484 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 ARL5CA6NH57 179 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 LRRIQ4A6NIV6 560 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 E9PMD0 336 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 POMCP01189 267 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 ITGA4P13612 1032 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 MLH1P40692 756 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 NAMPTP43490 491 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 KRT17Q04695 432 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 MAPK7Q13164 816 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 SMC1AQ14683 1233 aaKnown RBP11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 HYIQ5T013 277 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 SYCE2Q6PIF2 218 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 COLGALT2Q8IYK4 626 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 TMEM169Q96HH4 297 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 PNMA5Q96PV4 448 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 GAD1Q99259 594 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 TMEM175Q9BSA9 504 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 S1PR5Q9H228 398 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 PDZD7Q9H5P4 517 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 PRMT7Q9NVM4 692 aaPredicted RBP11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 MARCH5Q9NX47 278 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 SMC3Q9UQE7 1217 aa11.72□□□□□ -0.53
SUPT4H1-204ENST00000580947 FSD2A1L4K1 749 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 CARNS1A5YM72 827 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 PI4K2BG5E9Z4 385 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 LILRB3O75022 631 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 CLASP2O75122 1294 aaKnown RBP11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 CTSAP10619 480 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 MCTP1Q6DN14 999 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 ANKRD54Q6NXT1 300 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 DTHD1Q6ZMT9 781 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 TMC7Q7Z402 723 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 VPS52Q8N1B4 723 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 URGCPQ8TCY9 931 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 LRRC15Q8TF66 581 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 AUTS2Q8WXX7 1259 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 KIFC3Q9BVG8 833 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 RUSC1Q9BVN2 902 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 GBP3Q9H0R5 595 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 CXCL16Q9H2A7 254 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 UBN1Q9NPG3 1134 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 KANSL3Q9P2N6 904 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 FAM50BQ9Y247 325 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 USP20Q9Y2K6 914 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 GIT1Q9Y2X7 761 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 USP15Q9Y4E8 981 aaPredicted RBP11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 HCFC2Q9Y5Z7 792 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 STK24Q9Y6E0 443 aa11.71□□□□□ -0.53
SUPT4H1-204ENST00000580947 F8W810 466 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 H3BQV1 296 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 ACKR2O00590 384 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 NRP1O14786 923 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 NPTXRO95502 500 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 AKAP5P24588 427 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 SCNN1GP51170 649 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 PTPN14Q15678 1187 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 TMEM119Q4V9L6 283 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 NT5DC1Q5TFE4 455 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 KRT79Q5XKE5 535 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 EEF1DP3Q658K8 133 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 LARP1BQ659C4 914 aaKnown RBP11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 ARL6IP4Q66PJ3 421 aaKnown RBP11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 RINT1Q6NUQ1 792 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 C1orf186Q6ZWK4 172 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 ZBTB8OSQ8IWT0 167 aa11.7□□□□□ -0.54
SUPT4H1-204ENST00000580947 SLC22A17Q8WUG5 538 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms