RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 ARMCX3Q9UH62 379 aaPredicted RBP8.72□□□□□ -1.01
KPNB1-210ENST00000580573 TSKSQ9UJT2 592 aa8.72□□□□□ -1.01
KPNB1-210ENST00000580573 SIK3Q9Y2K2 1263 aa8.72□□□□□ -1.01
KPNB1-210ENST00000580573 TRIP11Q15643 1979 aa8.72□□□□□ -1.01
KPNB1-210ENST00000580573 SMIM35A0A1B0GVV1 85 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 A0A1W2PQJ5 194 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 TISP43B9A030 160 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 ANKRD63C9JTQ0 380 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 CLIC2O15247 247 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 FAM189A1O60320 539 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 GYPCP04921 128 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 SMIM10L2AP0DMW4 78 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 SMIM10L2BP0DMW5 78 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 RARBP10826 455 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 EPB41P11171 864 aaKnown RBP8.71□□□□□ -1.02
KPNB1-210ENST00000580573 ELNP15502 786 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 HSPA6P17066 643 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 PROZP22891 400 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 CCND3P30281 292 aaPredicted RBP8.71□□□□□ -1.02
KPNB1-210ENST00000580573 MTIF2P46199 727 aaKnown RBP8.71□□□□□ -1.02
KPNB1-210ENST00000580573 KCNJ6P48051 423 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 PSEN2P49810 448 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 CLDN10P78369 228 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 MAP2K1Q02750 393 aaPredicted RBP8.71□□□□□ -1.02
KPNB1-210ENST00000580573 MBTD1Q05BQ5 628 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 TFDP1Q14186 410 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 C1orf220Q5T0J3 134 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 ARMCX5Q6P1M9 558 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 ZNF410Q86VK4 478 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 PACS2Q86VP3 889 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 TMEM139Q8IV31 216 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 LRRC8AQ8IWT6 810 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 KIAA0319LQ8IZA0 1049 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 SYCP3Q8IZU3 236 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 TC2NQ8N9U0 490 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 XXYLT1Q8NBI6 393 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 SPC24Q8NBT2 197 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 DEPTORQ8TB45 409 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 CACTINQ8WUQ7 758 aaKnown RBP8.71□□□□□ -1.02
KPNB1-210ENST00000580573 CBWD1Q9BRT8 395 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 PTPRHQ9HD43 1115 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 HSPBP1Q9NZL4 362 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 SUCLA2Q9P2R7 463 aaPredicted RBP8.71□□□□□ -1.02
KPNB1-210ENST00000580573 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 DNAH12Q6ZR08 3092 aa8.71□□□□□ -1.02
KPNB1-210ENST00000580573 A0A0B4J269 797 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 LRRIQ4A6NIV6 560 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 K7ERI5 159 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 HNRNPDLO14979 420 aaKnown RBP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 TOM1L1O75674 476 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 TPM2P07951 284 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 TMOD1P28289 359 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 CLCN3P51790 818 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 CCZ1BP86790 482 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 CCZ1P86791 482 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 CDC42EP1Q00587 391 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 BEX3Q00994 111 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 UBXN1Q04323 297 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 BFSP1Q12934 665 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 STRN3Q13033 797 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 CCDC40Q4G0X9 1142 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 CEP135Q66GS9 1140 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 SLFN12LQ6IEE8 588 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 NFRKBQ6P4R8 1299 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 TSHZ1Q6ZSZ6 1077 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 INTS8Q75QN2 995 aaKnown RBP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 RPAINQ86UA6 219 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 FAM186BQ8IYM0 893 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 RNF149Q8NC42 400 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 PRIMPOLQ96LW4 560 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 MFSD14AQ96MC6 490 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 MTG1Q9BT17 334 aaPredicted RBP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 EDEM3Q9BZQ6 932 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 HAPLN2Q9GZV7 340 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 ADAMTS10Q9H324 1103 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 SUGCTQ9HAC7 445 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 KIAA1586Q9HCI6 787 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 DDX20Q9UHI6 824 aaKnown RBP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 FBXL5Q9UKA1 691 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 USP20Q9Y2K6 914 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■□□□ 11.8
KPNB1-210ENST00000580573 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.7□□□□□ -1.02
KPNB1-210ENST00000580573 CNTNAP2Q9UHC6 1331 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 BRCA2P51587 3418 aa8.7□□□□□ -1.02
KPNB1-210ENST00000580573 TANC1Q9C0D5 1861 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 ACKR2O00590 384 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 P4HA2O15460 535 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 EXTL3O43909 919 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 EXOC3O60645 756 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 MFAP3LO75121 409 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 GPR32O75388 356 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 AFPP02771 609 aaKnown RBP8.69□□□□□ -1.02
KPNB1-210ENST00000580573 INHAP05111 366 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 ADRB2P07550 413 aa8.69□□□□□ -1.02
KPNB1-210ENST00000580573 GJB1P08034 283 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms