RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 RNF39Q9H2S5 420 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 FZD8Q9H461 694 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 TLE6Q9H808 572 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 C17orf75Q9HAS0 396 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 RC3H2Q9HBD1 1191 aaKnown RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 ENTPD7Q9NQZ7 604 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 KCND2Q9NZV8 630 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 KLK14Q9P0G3 267 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 LARSQ9P2J5 1176 aaKnown RBP7.22□□□□□ -1.25
TRAF4-213ENST00000578917 CFAP45Q9UL16 551 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 FAN1Q9Y2M0 1017 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 HES2Q9Y543 173 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 IPPQ9Y573 584 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 PHLPP2Q6ZVD8 1323 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 CNTNAP2Q9UHC6 1331 aa7.22□□□□□ -1.25
TRAF4-213ENST00000578917 NPHP3-ACAD11A0A0J9YXS1 232 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 ARL5CA6NH57 179 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 MEIS3P2A8K0S8 358 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 H0YCG3 227 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 CXCL14O95715 111 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 PLS3P13797 630 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 GUCY2CP25092 1073 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 MLH1P40692 756 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 STAT6P42226 847 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 OR1G1P47890 313 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 YARSP54577 528 aaKnown RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 CACNB1Q02641 598 aaPredicted RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 UBE3AQ05086 875 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 GRIN1Q05586 938 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 MCM6Q14566 821 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 TJAP1Q5JTD0 557 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 HYIQ5T013 277 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 UBXN11Q5T124 520 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 ATF7IP2Q5U623 682 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 CDCA2Q69YH5 1023 aaPredicted RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 PDE12Q6L8Q7 609 aaKnown RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 AGMOQ6ZNB7 445 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 CCDC73Q6ZRK6 1079 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 SV2BQ7L1I2 683 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 ZBTB33Q86T24 672 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 SMG8Q8ND04 991 aaKnown RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 BSNDQ8WZ55 320 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 MRPS27Q92552 414 aaKnown RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 RAD54LQ92698 747 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 RPS6KC1Q96S38 1066 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 GAD1Q99259 594 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 TCF25Q9BQ70 676 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 MRPL4Q9BYD3 311 aaKnown RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 NXF3Q9H4D5 531 aaKnown RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 CWH43Q9H720 699 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 TLR9Q9NR96 1032 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 TBC1D13Q9NVG8 400 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 CLDND1Q9NY35 253 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 HCSTQ9UBK5 93 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 FBXO2Q9UK22 296 aaPredicted RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 GDAQ9Y2T3 454 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 GIT1Q9Y2X7 761 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 PRRC2BQ5JSZ5 2229 aaKnown RBP7.21□□□□□ -1.26
TRAF4-213ENST00000578917 TANC1Q9C0D5 1861 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 CDH23Q9H251 3354 aa7.21□□□□□ -1.26
TRAF4-213ENST00000578917 MYH9P35579 1960 aaKnown RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 SPDYE4A6NLX3 237 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 H3BQ06 376 aaPredicted RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PER2O15055 1255 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 TADA2AO75478 443 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 F13A1P00488 732 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 LINC00271P0C7V0 271 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 SRGAP2BP0DMP2 458 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 HARSP12081 509 aaKnown RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 IDEP14735 1019 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ATF7P17544 494 aaPredicted RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 DNAJB1P25685 340 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 NRIP1P48552 1158 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 NDUFV1P49821 464 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 SCNN1GP51170 649 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 SLC12A3P55017 1021 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ERVFC1P60507 584 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 OSTNP61366 133 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PLCB3Q01970 1234 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PTPAQ15257 358 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 AMHR2Q16671 573 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 FAM187BQ17R55 369 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 DCAF4L1Q3SXM0 396 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 TPRNQ4KMQ1 711 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 TMEM119Q4V9L6 283 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ARSHQ5FYA8 562 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PLPP4Q5VZY2 271 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ATL3Q6DD88 541 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 KIAA1841Q6NSI8 718 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PPP4R3CPQ6ZMV5 832 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 USP49Q70CQ1 688 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 DYMQ7RTS9 669 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ZNF280BQ86YH2 543 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 VPS52Q8N1B4 723 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 PDILTQ8N807 584 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 KCNG4Q8TDN1 519 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 SPIRE2Q8WWL2 714 aa7.2□□□□□ -1.26
TRAF4-213ENST00000578917 LARP4BQ92615 738 aaKnown RBP7.2□□□□□ -1.26
TRAF4-213ENST00000578917 ZFP42Q96MM3 310 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms