RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, human

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX42-205	ENST00000577978	PEX11B	O96011	259 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	DDX10	Q13206	875 aa	Known RBP	4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	VPS72	Q15906	364 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	ARHGAP44	Q17R89	818 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	CATSPERE	Q5SY80	951 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	LILRB2	Q8N423	598 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	C2orf69	Q8N8R5	385 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	IGSF22	Q8N9C0	903 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	PMFBP1	Q8TBY8	1022 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	RABGGTA	Q92696	567 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	FOXB1	Q99853	325 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	BOC	Q9BWV1	1114 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	OSBPL2	Q9H1P3	480 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	NALCN	Q8IZF0	1738 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	KIAA1107	Q9UPP5	1409 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	FYCO1	Q9BQS8	1478 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	TULP4	Q9NRJ4	1543 aa		4.62	□□□□□ -1.67
DDX42-205	ENST00000577978	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	H2AFY	O75367	372 aa	Known RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	ZBTB48	P10074	688 aa	Predicted RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	FNTB	P49356	437 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	MECP2	P51608	486 aa	Known RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	STAT5B	P51692	787 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	IRF9	Q00978	393 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	RIN1	Q13671	783 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	TMEM132B	Q14DG7	1078 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	NFE2L2	Q16236	605 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	FNDC3B	Q53EP0	1204 aa	Known RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	CC2D1A	Q6P1N0	951 aa	Predicted RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	KLHDC10	Q6PID8	442 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	TMPRSS6	Q8IU80	811 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	NEU4	Q8WWR8	484 aa	Predicted RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	DDX17	Q92841	729 aa	Known RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	GFM2	Q969S9	779 aa	Known RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	ZBED9	Q6R2W3	1325 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	PRX	Q9BXM0	1461 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	EHBP1L1	Q8N3D4	1523 aa		4.61	□□□□□ -1.67
DDX42-205	ENST00000577978	NRAP	Q86VF7	1730 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	TNRC18	O15417	2968 aa	Predicted RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978		A0A1W2PRX2	142 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	KIF3B	O15066	747 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	TOMM70	O94826	608 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	IGFALS	P35858	605 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	ALDH6A1	Q02252	535 aa	Known RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	CRHR2	Q13324	411 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	DDX53	Q86TM3	631 aa	Known RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	RTN4RL1	Q86UN2	441 aa	Predicted RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	SREK1	Q8WXA9	508 aa	Known RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	FOXRED1	Q96CU9	486 aa	Predicted RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	TMEM176A	Q96HP8	235 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	PRRX2	Q99811	253 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	SLC6A15	Q9H2J7	730 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	IKZF4	Q9H2S9	585 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	CEP72	Q9P209	647 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	SAE1	Q9UBE0	346 aa	Predicted RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	PIK3R4	Q99570	1358 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	PLEKHG1	Q9ULL1	1385 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	NOS1	P29475	1434 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	SMG6	Q86US8	1419 aa	Known RBP	4.6	□□□□□ -1.67
DDX42-205	ENST00000577978	CEP152	O94986	1710 aa		4.6	□□□□□ -1.67
DDX42-205	ENST00000577978		A0A087X1B8	175 aa		4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	TCERG1	O14776	1098 aa	Known RBP	4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	ROM1	Q03395	351 aa		4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	FNDC7	Q5VTL7	733 aa		4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	ZNF662	Q6ZS27	426 aa		4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	XRN1	Q8IZH2	1706 aa	Known RBP	4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	BCL6B	Q8N143	479 aa	Predicted RBP	4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	CCNB3	Q8WWL7	1395 aa		4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	GCDH	Q92947	438 aa	Predicted RBP	4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	ABHD8	Q96I13	439 aa		4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	MMRN2	Q9H8L6	949 aa		4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	AGO3	Q9H9G7	860 aa	Known RBP	4.59	□□□□□ -1.67
DDX42-205	ENST00000577978	CFAP65	Q6ZU64	1925 aa	Known RBP	4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	ADGRL2	O95490	1459 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	C1orf167	Q5SNV9	1468 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	ADGRL3	Q9HAR2	1447 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	RAB3GAP2	Q9H2M9	1393 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978		M0R2C6	588 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	GLRX3	O76003	335 aa	Known RBP	4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	ASL	P04424	464 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	ADCY7	P51828	1080 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	ADAM15	Q13444	863 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	RRP1B	Q14684	758 aa	Known RBP	4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	MRGPRG	Q86SM5	289 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	CHST14	Q8NCH0	376 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	ERCC4	Q92889	916 aa	Predicted RBP	4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	MIEF2	Q96C03	454 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	CLUHP3	Q96NS8	147 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	DNAJC2	Q99543	621 aa	Known RBP	4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	MTFR1L	Q9H019	292 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	ACSS2	Q9NR19	701 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	SAMD15	Q9P1V8	674 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	DENND2A	Q9ULE3	1009 aa		4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	REXO2	Q9Y3B8	237 aa	Known RBP	4.58	□□□□□ -1.68
DDX42-205	ENST00000577978	SH3BP1	Q9Y3L3	701 aa		4.58	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms