RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 LARP4BQ92615 738 aaKnown RBP25.89■■□□□ 1.74
SNF8-217ENST00000576353 NSUN3Q9H649 340 aaKnown RBP25.89■■□□□ 1.74
SNF8-217ENST00000576353 TMEM134Q9H6X4 195 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 PRDM6Q9NQX0 595 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 TBC1D13Q9NVG8 400 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 THEGQ9P2T0 379 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 STK17AQ9UEE5 414 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 ODF2LQ9ULJ1 636 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 COG5Q9UP83 839 aa25.89■■□□□ 1.74
SNF8-217ENST00000576353 FNDC1Q4ZHG4 1894 aaPredicted RBP25.89■■□□□ 1.73
SNF8-217ENST00000576353 PLCB3Q01970 1234 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 MCM6Q14566 821 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 RRAGBQ5VZM2 374 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 ADPGKQ9BRR6 497 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 PDZD7Q9H5P4 517 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 SPG21Q9NZD8 308 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 LARSQ9P2J5 1176 aaKnown RBP25.88■■□□□ 1.73
SNF8-217ENST00000576353 ARHGAP28Q9P2N2 729 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 PUF60Q9UHX1 559 aaKnown RBP25.88■■□□□ 1.73
SNF8-217ENST00000576353 GIT1Q9Y2X7 761 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 HES2Q9Y543 173 aa25.88■■□□□ 1.73
SNF8-217ENST00000576353 NLRC5Q86WI3 1866 aa25.87■■□□□ 1.73
SNF8-217ENST00000576353 KRT18P05783 430 aaKnown RBP25.87■■□□□ 1.73
SNF8-217ENST00000576353 KRT17Q04695 432 aa25.87■■□□□ 1.73
SNF8-217ENST00000576353 FOXD4L6Q3SYB3 417 aaPredicted RBP25.87■■□□□ 1.73
SNF8-217ENST00000576353 FOXD4L3Q6VB84 417 aaPredicted RBP25.87■■□□□ 1.73
SNF8-217ENST00000576353 APBB1IPQ7Z5R6 666 aaPredicted RBP25.87■■□□□ 1.73
SNF8-217ENST00000576353 LRRC15Q8TF66 581 aa25.87■■□□□ 1.73
SNF8-217ENST00000576353 ATXN2LQ8WWM7 1075 aaKnown RBP25.87■■□□□ 1.73
SNF8-217ENST00000576353 RNF39Q9H2S5 420 aa25.87■■□□□ 1.73
SNF8-217ENST00000576353 NXF3Q9H4D5 531 aaKnown RBP25.87■■□□□ 1.73
SNF8-217ENST00000576353 CFAP45Q9UL16 551 aa25.87■■□□□ 1.73
SNF8-217ENST00000576353 LZTS1Q9Y250 596 aa25.87■■□□□ 1.73
SNF8-217ENST00000576353 NPHP3-ACAD11A0A0J9YXS1 232 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 TTLL13PA6NNM8 815 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 SLC16A4O15374 487 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 DNAJB1P25685 340 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 BCAR1P56945 870 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 CAMK1Q14012 370 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 CCDC73Q6ZRK6 1079 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 HLA-CQ95604 372 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 APOL6Q9BWW8 343 aa25.86■■□□□ 1.73
SNF8-217ENST00000576353 ARL5CA6NH57 179 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 H0YCG3 227 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 INPPL1O15357 1258 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 ZC3H11AO75152 810 aaKnown RBP eCLIP25.85■■□□□ 1.73
SNF8-217ENST00000576353 TCEAL5Q5H9L2 206 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 NT5DC1Q5TFE4 455 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 ATF7IP2Q5U623 682 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 PDE12Q6L8Q7 609 aaKnown RBP25.85■■□□□ 1.73
SNF8-217ENST00000576353 SLC39A11Q8N1S5 342 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 KCNG4Q8TDN1 519 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 MRPS27Q92552 414 aaKnown RBP25.85■■□□□ 1.73
SNF8-217ENST00000576353 PPP2R3CQ969Q6 453 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 FAM193BQ96PV7 902 aaPredicted RBP25.85■■□□□ 1.73
SNF8-217ENST00000576353 GAD1Q99259 594 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 REEP2Q9BRK0 252 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 MRPL4Q9BYD3 311 aaKnown RBP25.85■■□□□ 1.73
SNF8-217ENST00000576353 NRDE2Q9H7Z3 1164 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 USP20Q9Y2K6 914 aa25.85■■□□□ 1.73
SNF8-217ENST00000576353 NCK2O43639 380 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 FAM13AO94988 1023 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 PBX3P40426 434 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 MRPS5P82675 430 aaKnown RBP25.84■■□□□ 1.73
SNF8-217ENST00000576353 CACNB1Q02641 598 aaPredicted RBP25.84■■□□□ 1.73
SNF8-217ENST00000576353 STRN3Q13033 797 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 GIT2Q14161 759 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 AAK1Q2M2I8 961 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 DCAF4L1Q3SXM0 396 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 MICAL1Q8TDZ2 1067 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 GBP3Q9H0R5 595 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 TLR9Q9NR96 1032 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 PARP2Q9UGN5 583 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 TNFSF13BQ9Y275 285 aa25.84■■□□□ 1.73
SNF8-217ENST00000576353 EYSQ5T1H1 3165 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 CUTAO60888 179 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 CSPG5O95196 566 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 BRD1O95696 1058 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 POMCP01189 267 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 EDN1P05305 212 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 SCP2P22307 547 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 AKAP5P24588 427 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 MLH1P40692 756 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 AFF1P51825 1210 aaKnown RBP25.83■■□□□ 1.73
SNF8-217ENST00000576353 SV2BQ7L1I2 683 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 ZNF280BQ86YH2 543 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 MYCT1Q8N699 235 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 TMEM161BQ8NDZ6 487 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 PARVGQ9HBI0 331 aa25.83■■□□□ 1.73
SNF8-217ENST00000576353 ZMYM2Q9UBW7 1377 aa25.82■■□□□ 1.72
SNF8-217ENST00000576353 TBCAO75347 108 aaKnown RBP25.82■■□□□ 1.72
SNF8-217ENST00000576353 ALDH2P05091 517 aa25.82■■□□□ 1.72
SNF8-217ENST00000576353 GALTP07902 379 aa25.82■■□□□ 1.72
SNF8-217ENST00000576353 STAT6P42226 847 aa25.82■■□□□ 1.72
SNF8-217ENST00000576353 ZNF131P52739 623 aa25.82■■□□□ 1.72
SNF8-217ENST00000576353 DNM1Q05193 864 aaKnown RBP25.82■■□□□ 1.72
SNF8-217ENST00000576353 EEF1DP3Q658K8 133 aa25.82■■□□□ 1.72
SNF8-217ENST00000576353 TMEM169Q96HH4 297 aa25.82■■□□□ 1.72
SNF8-217ENST00000576353 ACO2Q99798 780 aaKnown RBP25.82■■□□□ 1.72
SNF8-217ENST00000576353 TMEM175Q9BSA9 504 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms