RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 C1orf186Q6ZWK4 172 aa16.81■□□□□ 0.28
SMG6-220ENST00000576218 TMEM87AQ8NBN3 555 aa16.81■□□□□ 0.28
SMG6-220ENST00000576218 SYMPKQ92797 1274 aaKnown RBP16.81■□□□□ 0.28
SMG6-220ENST00000576218 NXF3Q9H4D5 531 aaKnown RBP16.81■□□□□ 0.28
SMG6-220ENST00000576218 ZHX3Q9H4I2 956 aa16.81■□□□□ 0.28
SMG6-220ENST00000576218 C17orf75Q9HAS0 396 aa16.81■□□□□ 0.28
SMG6-220ENST00000576218 TBC1D13Q9NVG8 400 aa16.81■□□□□ 0.28
SMG6-220ENST00000576218 KCNG1Q9UIX4 513 aa16.81■□□□□ 0.28
SMG6-220ENST00000576218 FBXO2Q9UK22 296 aaPredicted RBP16.81■□□□□ 0.28
SMG6-220ENST00000576218 SRPRBQ9Y5M8 271 aaKnown RBP16.81■□□□□ 0.28
SMG6-220ENST00000576218 EYSQ5T1H1 3165 aa16.81■□□□□ 0.28
SMG6-220ENST00000576218 A0A1B0GUA9 196 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 SFI1A8K8P3 1242 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 NT5C1B-RDH14C9J2C7 533 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 ACKR2O00590 384 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 NCK2O43639 380 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 NR1I2O75469 434 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 FAM13AO94988 1023 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 F13A1P00488 732 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 POMCP01189 267 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 NPTX2P47972 431 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 SLC12A3P55017 1021 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 BCAR1P56945 870 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 TFF2Q03403 129 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 FAM187BQ17R55 369 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 MRPL10Q7Z7H8 261 aaKnown RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 SMG8Q8ND04 991 aaKnown RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 MRPS27Q92552 414 aaKnown RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 CLIC6Q96NY7 704 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 FZD8Q9H461 694 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 PDZD7Q9H5P4 517 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 UBE2ZQ9H832 354 aaPredicted RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 CLDND1Q9NY35 253 aa16.8■□□□□ 0.28
SMG6-220ENST00000576218 LARSQ9P2J5 1176 aaKnown RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 DAXXQ9UER7 740 aaPredicted RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 RBM19Q9Y4C8 960 aaKnown RBP16.8■□□□□ 0.28
SMG6-220ENST00000576218 SPTLC2O15270 562 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 SLC16A4O15374 487 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 PLS3P13797 630 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 KCNA5P22460 613 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 AKAP5P24588 427 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 MCM6Q14566 821 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 DCAF4L1Q3SXM0 396 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 ATF7IP2Q5U623 682 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 RRAGBQ5VZM2 374 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 PLPP4Q5VZY2 271 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 TMC7Q7Z402 723 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 RAD54LQ92698 747 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 BICD1Q96G01 975 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 EPSTI1Q96J88 318 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 ASB2Q96Q27 587 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 GAD1Q99259 594 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 TCF25Q9BQ70 676 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 TCHPQ9BT92 498 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 MRPL4Q9BYD3 311 aaKnown RBP16.79■□□□□ 0.28
SMG6-220ENST00000576218 CCSER1Q9C0I3 900 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 CCDC113Q9H0I3 377 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 TFIP11Q9UBB9 837 aaKnown RBP16.79■□□□□ 0.28
SMG6-220ENST00000576218 GIT1Q9Y2X7 761 aa16.79■□□□□ 0.28
SMG6-220ENST00000576218 NPHP3-ACAD11A0A0J9YXS1 232 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 ARL5CA6NH57 179 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 H0YCG3 227 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 DLL1O00548 723 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 DNAJB1P25685 340 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 IRS1P35568 1242 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 STAT6P42226 847 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.28
SMG6-220ENST00000576218 SCNN1GP51170 649 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 PLCB3Q01970 1234 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 PDE12Q6L8Q7 609 aaKnown RBP16.78■□□□□ 0.28
SMG6-220ENST00000576218 RBM23Q86U06 439 aaKnown RBP16.78■□□□□ 0.28
SMG6-220ENST00000576218 SLC39A11Q8N1S5 342 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 MYCT1Q8N699 235 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 NRDE2Q9H7Z3 1164 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 TLE6Q9H808 572 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 KLK14Q9P0G3 267 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 STK17AQ9UEE5 414 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 ODF2LQ9ULJ1 636 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 LZTS1Q9Y250 596 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 USP20Q9Y2K6 914 aa16.78■□□□□ 0.28
SMG6-220ENST00000576218 PRUNE2Q8WUY3 3088 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 K7ENM7 598 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 OR1G1P47890 313 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 NRIP1P48552 1158 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
SMG6-220ENST00000576218 MAPK7Q13164 816 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 ZNF568Q3ZCX4 644 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 CCDC73Q6ZRK6 1079 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 DAW1Q8N136 415 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 PABPC5Q96DU9 382 aaKnown RBP16.77■□□□□ 0.28
SMG6-220ENST00000576218 ZFP42Q96MM3 310 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 REEP2Q9BRK0 252 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 TMEM134Q9H6X4 195 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 DNAJB4Q9UDY4 337 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 FAN1Q9Y2M0 1017 aa16.77■□□□□ 0.28
SMG6-220ENST00000576218 GDAQ9Y2T3 454 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms