RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	ARSH	Q5FYA8	562 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	KCNT2	Q6UVM3	1135 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	USP49	Q70CQ1	688 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	SPPL3	Q8TCT6	385 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	NSUN3	Q9H649	340 aa	Known RBP	27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	TBC1D13	Q9NVG8	400 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	CFAP45	Q9UL16	551 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	INPP5F	Q9Y2H2	1132 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701	MYH11	P35749	1972 aa		27.88	■■■□□ 2.05
SRRM2-223	ENST00000575701		H0YCG3	227 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	INPPL1	O15357	1258 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	FGF18	O76093	207 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	NPTXR	O95502	500 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	SCP2	P22307	547 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	PLCB3	Q01970	1234 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	RNASEL	Q05823	741 aa	Known RBP	27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	RAD51AP2	Q09MP3	1159 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	MCM6	Q14566	821 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	RRAGB	Q5VZM2	374 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	CCDC73	Q6ZRK6	1079 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	KCNG4	Q8TDN1	519 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	LRRC15	Q8TF66	581 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	PDZD7	Q9H5P4	517 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	COG5	Q9UP83	839 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	LZTS1	Q9Y250	596 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	GIT1	Q9Y2X7	761 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	PLXNA4	Q9HCM2	1894 aa		27.87	■■■□□ 2.05
SRRM2-223	ENST00000575701	DHX8	Q14562	1220 aa	Known RBP	27.86	■■■□□ 2.05
SRRM2-223	ENST00000575701	POF1B	Q8WVV4	589 aa		27.86	■■■□□ 2.05
SRRM2-223	ENST00000575701	NXF3	Q9H4D5	531 aa	Known RBP	27.86	■■■□□ 2.05
SRRM2-223	ENST00000575701	SFI1	A8K8P3	1242 aa		27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	BRD1	O95696	1058 aa		27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	KRT18	P05783	430 aa	Known RBP	27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	ALDH7A1	P49419	539 aa	Known RBP	27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	DCAF4L1	Q3SXM0	396 aa		27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	CDR2L	Q86X02	465 aa	Predicted RBP	27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	ATXN2L	Q8WWM7	1075 aa	Known RBP	27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	PPP2R3C	Q969Q6	453 aa		27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	REEP2	Q9BRK0	252 aa		27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	SPG21	Q9NZD8	308 aa		27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	PUF60	Q9UHX1	559 aa	Known RBP	27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	HES2	Q9Y543	173 aa		27.85	■■■□□ 2.05
SRRM2-223	ENST00000575701	CUTA	O60888	179 aa		27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	ZC3H11A	O75152	810 aa	Known RBP eCLIP	27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	BCAR1	P56945	870 aa		27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	KRT17	Q04695	432 aa		27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	ATF7IP2	Q5U623	682 aa		27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	MRPS27	Q92552	414 aa	Known RBP	27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	KCNN1	Q92952	543 aa		27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	MRPL4	Q9BYD3	311 aa	Known RBP	27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	PARVG	Q9HBI0	331 aa		27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	ATG2A	Q2TAZ0	1938 aa		27.84	■■■□□ 2.05
SRRM2-223	ENST00000575701	NPHP3-ACAD11	A0A0J9YXS1	232 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	ARL5C	A6NH57	179 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	TTLL13P	A6NNM8	815 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	SLC16A4	O15374	487 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	TBCA	O75347	108 aa	Known RBP	27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	FAM13A	O94988	1023 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	ZNF131	P52739	623 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	STRN3	Q13033	797 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	CAMK1	Q14012	370 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	PDE12	Q6L8Q7	609 aa	Known RBP	27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	SLC39A11	Q8N1S5	342 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	FAM193B	Q96PV7	902 aa	Predicted RBP	27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	APOL6	Q9BWW8	343 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	RNF39	Q9H2S5	420 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	NRDE2	Q9H7Z3	1164 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	TLR9	Q9NR96	1032 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	TNFSF13B	Q9Y275	285 aa		27.83	■■■□□ 2.05
SRRM2-223	ENST00000575701	NCK2	O43639	380 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	EDN1	P05305	212 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	DNAJB1	P25685	340 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	ABCD1	P33897	745 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	MLH1	P40692	756 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	STAT6	P42226	847 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	NCKAP1L	P55160	1127 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	CACNB1	Q02641	598 aa	Predicted RBP	27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	GIT2	Q14161	759 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	AAK1	Q2M2I8	961 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	TCEAL5	Q5H9L2	206 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	NT5DC1	Q5TFE4	455 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	FOXD4L3	Q6VB84	417 aa	Predicted RBP	27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	TMEM161B	Q8NDZ6	487 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	HLA-C	Q95604	372 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	GAD1	Q99259	594 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	TMEM175	Q9BSA9	504 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	PRDM6	Q9NQX0	595 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	ATP6V1D	Q9Y5K8	247 aa		27.82	■■■□□ 2.04
SRRM2-223	ENST00000575701	PBX3	P40426	434 aa		27.81	■■■□□ 2.04
SRRM2-223	ENST00000575701	SV2B	Q7L1I2	683 aa		27.81	■■■□□ 2.04
SRRM2-223	ENST00000575701	TAS1R3	Q7RTX0	852 aa		27.81	■■■□□ 2.04
SRRM2-223	ENST00000575701	TMEM169	Q96HH4	297 aa		27.81	■■■□□ 2.04
SRRM2-223	ENST00000575701	PARP2	Q9UGN5	583 aa		27.81	■■■□□ 2.04
SRRM2-223	ENST00000575701	POMC	P01189	267 aa		27.8	■■■□□ 2.04
SRRM2-223	ENST00000575701	MAPT	P10636	758 aa	Known RBP	27.8	■■■□□ 2.04
SRRM2-223	ENST00000575701	DNM1	Q05193	864 aa	Known RBP	27.8	■■■□□ 2.04
SRRM2-223	ENST00000575701	EEF1DP3	Q658K8	133 aa		27.8	■■■□□ 2.04
SRRM2-223	ENST00000575701	MYCT1	Q8N699	235 aa		27.8	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms