RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 KREMEN1Q96MU8 473 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 CCT8L2Q96SF2 557 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 IWS1Q96ST2 819 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 PSMD1Q99460 953 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 FMO2Q99518 471 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 CENPHQ9H3R5 247 aa9.65□□□□□ -0.86
NCBP3-204ENST00000574911 SYNGAP1Q96PV0 1343 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 KIAA0391O15091 583 aaKnown RBP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 PHF2O75151 1096 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 GGPS1O95749 300 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 ADRB2P07550 413 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 GZMAP12544 262 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 MXI1P50539 228 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 SEC24CP53992 1094 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 PPP2R2AP63151 447 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 MTMR1Q13613 665 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 UGCGQ16739 394 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 ZDHHC24Q6UX98 284 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 JAMLQ86YT9 394 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 SLC17A8Q8NDX2 589 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 EPS8L1Q8TE68 723 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 CD101Q93033 1021 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 ZNF341Q9BYN7 854 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 TRIM31Q9BZY9 425 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 EPB41L4BQ9H329 900 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 MAP3K20Q9NYL2 800 aaKnown RBP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 GGA2Q9UJY4 613 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 TMEM150BA6NC51 233 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 WDR46O15213 610 aaKnown RBP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 SLC16A4O15374 487 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 FAM107AO95990 144 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 ALAS1P13196 640 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 COMTP21964 271 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 CHRNA3P32297 505 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 MARCKSL1P49006 195 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 EIF3BP55884 814 aaKnown RBP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 PEX3P56589 373 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 ZNF746Q6NUN9 644 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 RTKN2Q8IZC4 609 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 SAMD3Q8N6K7 520 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 PRELID2Q8N945 189 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 GLG1Q92896 1179 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 TAAR1Q96RJ0 339 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 WNT8AQ9H1J5 351 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 LRRC4CQ9HCJ2 640 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 GPRC5CQ9NQ84 441 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 ANKEF1Q9NU02 776 aa9.64□□□□□ -0.87
NCBP3-204ENST00000574911 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 CNOT8Q9UFF9 292 aaKnown RBP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 NOVA2Q9UNW9 492 aaKnown RBP9.64□□□□□ -0.87
NCBP3-204ENST00000574911 GOLGA8IPA6NC78 632 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 GOLGA8JA6NMD2 632 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 TMEM110-MUSTN1A8MSY1 372 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 PHF20L1A8MW92 1017 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 CYP1A2P05177 515 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 PAEPP09466 180 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 ADSSP30520 456 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 PSMC5P62195 406 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 FMO1Q01740 532 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 RASA3Q14644 834 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 PGM5Q15124 567 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 ZDHHC14Q8IZN3 488 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 MICALL1Q8N3F8 863 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 SHC3Q92529 594 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 SEMA4DQ92854 862 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 TLCD1Q96CP7 247 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 SH2D3AQ9BRG2 576 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 SLC38A10Q9HBR0 1119 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 GRHL1Q9NZI5 618 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 PCYOX1Q9UHG3 505 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 RASAL2Q9UJF2 1139 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 ATP8A1Q9Y2Q0 1164 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 COQ4Q9Y3A0 265 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 ANKRD63C9JTQ0 380 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 MEFVO15553 781 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-204ENST00000574911 CYP26A1O43174 497 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 ERLIN2O94905 339 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 NUDT17P0C025 328 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 USP8P40818 1118 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 JAK3P52333 1124 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 MFAP3P55082 362 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 MAP2K1Q02750 393 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-204ENST00000574911 MESDQ14696 234 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 KRT71Q3SY84 523 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 MICALCLQ6ZW33 695 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
NCBP3-204ENST00000574911 SLC47A2Q86VL8 602 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 CBWD2Q8IUF1 395 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 C3orf20Q8ND61 904 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 HELQQ8TDG4 1101 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 LPAR1Q92633 364 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 HVCN1Q96D96 273 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 C18orf8Q96DM3 657 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 RAVER2Q9HCJ3 691 aaKnown RBP9.63□□□□□ -0.87
NCBP3-204ENST00000574911 ZNF277Q9NRM2 450 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-204ENST00000574911 TBX20Q9UMR3 447 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 EXOC7Q9UPT5 735 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 SNX24Q9Y343 169 aa9.63□□□□□ -0.87
NCBP3-204ENST00000574911 PCDHA3Q9Y5H8 950 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms