RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 RFC4P35249 363 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 IL6STP40189 918 aaPredicted RBP15.45■□□□□ 0.06
SMG6-215ENST00000574501 STAT3P40763 770 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 KCNA1Q09470 495 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 MKRN3Q13064 507 aaKnown RBP15.45■□□□□ 0.06
SMG6-215ENST00000574501 ZNF568Q3ZCX4 644 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 FOXB2Q5VYV0 432 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 OR52E8Q6IFG1 317 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 CPNE8Q86YQ8 564 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 UBL4BQ8N7F7 174 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 KIFAP3Q92845 792 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 NMRK1Q9NWW6 199 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 RGL1Q9NZL6 768 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 MINPP1Q9UNW1 487 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 POTEFA5A3E0 1075 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 TTLL1O95922 423 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 POTEIP0CG38 1075 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 RBM5P52756 815 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMG6-215ENST00000574501 ARHGAP44Q17R89 818 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 POTEGQ6S5H5 508 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 POTEEQ6S8J3 1075 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 ARHGEF18Q6ZSZ5 1173 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 SFR1Q86XK3 245 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 DZIP1Q86YF9 867 aaKnown RBP15.45■□□□□ 0.06
SMG6-215ENST00000574501 ENDOVQ8N8Q3 282 aaKnown RBP15.45■□□□□ 0.06
SMG6-215ENST00000574501 RBBP8NLQ8NC74 664 aaPredicted RBP15.45■□□□□ 0.06
SMG6-215ENST00000574501 B4GALNT2Q8NHY0 566 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 TGFBRAP1Q8WUH2 860 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 ZFAND2BQ8WV99 257 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 ITFG2Q969R8 447 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 GORASP1Q9BQQ3 440 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 SLCO1B3Q9NPD5 702 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 PCMTD2Q9NV79 361 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 DNAJC12Q9UKB3 198 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 TRAF3IP3Q9Y228 551 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 PASKQ96RG2 1323 aa15.45■□□□□ 0.06
SMG6-215ENST00000574501 SMAPO00193 183 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 MEIS1O00470 390 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 TP73O15350 636 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 NR3C1P04150 777 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 MESDQ14696 234 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 SEL1L2Q5TEA6 688 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 PRUNE1Q86TP1 453 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 FAM136AQ96C01 138 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 ZSWIM1Q9BR11 485 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 KIF13BQ9NQT8 1826 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 TAF1P21675 1872 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 NVLO15381 856 aaKnown RBP15.44■□□□□ 0.06
SMG6-215ENST00000574501 LRRN2O75325 713 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 ATP5HO75947 161 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 NTSR2O95665 410 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 CHRNB2P17787 502 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 COMTP21964 271 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 PSMC6P62333 389 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 STRN3Q13033 797 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 RCN2Q14257 317 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 TRIP13Q15645 432 aaPredicted RBP15.44■□□□□ 0.06
SMG6-215ENST00000574501 KHDC1Q4VXA5 237 aaKnown RBP15.44■□□□□ 0.06
SMG6-215ENST00000574501 RBM26Q5T8P6 1007 aaKnown RBP15.44■□□□□ 0.06
SMG6-215ENST00000574501 RFWD3Q6PCD5 774 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 APBB1IPQ7Z5R6 666 aaPredicted RBP15.44■□□□□ 0.06
SMG6-215ENST00000574501 VCXQ9H320 206 aa15.44■□□□□ 0.06
SMG6-215ENST00000574501 METTL5Q9NRN9 209 aaKnown RBP15.44■□□□□ 0.06
SMG6-215ENST00000574501 BSDC1Q9NW68 430 aaPredicted RBP15.44■□□□□ 0.06
SMG6-215ENST00000574501 ANKRD62A6NC57 917 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 CALUO43852 315 aaPredicted RBP15.43■□□□□ 0.06
SMG6-215ENST00000574501 SPAG7O75391 227 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 MED24O75448 989 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 RANBP1P43487 201 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 CLUL1Q15846 466 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 MIGA2Q7L4E1 593 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 CYFIP1Q7L576 1253 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 FBXO33Q7Z6M2 555 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 MAPKAPK5Q8IW41 473 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 C1orf54Q8WWF1 131 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 ZNF333Q96JL9 665 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 FGD4Q96M96 766 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 PHTF1Q9UMS5 762 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 NAALADL1Q9UQQ1 740 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 MAPK13O15264 365 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 THAP12O43422 761 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 ECEL1O95672 775 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 DLATP10515 647 aaKnown RBP15.43■□□□□ 0.06
SMG6-215ENST00000574501 HSPA6P17066 643 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 YARSP54577 528 aaKnown RBP15.43■□□□□ 0.06
SMG6-215ENST00000574501 SLC12A3P55017 1021 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 WDR4P57081 412 aaKnown RBP15.43■□□□□ 0.06
SMG6-215ENST00000574501 PABPC4Q13310 644 aaKnown RBP eCLIP15.43■□□□□ 0.06
SMG6-215ENST00000574501 CCDC6Q16204 474 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 CMPK2Q5EBM0 449 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 RPUSD2Q8IZ73 545 aaKnown RBP15.43■□□□□ 0.06
SMG6-215ENST00000574501 LRRC8CQ8TDW0 803 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 GRAMD1AQ96CP6 724 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 BORCS6Q96GS4 357 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 BTBD6Q96KE9 485 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 EYA3Q99504 573 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 STK33Q9BYT3 514 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 GPR88Q9GZN0 384 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 ASIC3Q9UHC3 531 aa15.43■□□□□ 0.06
SMG6-215ENST00000574501 SCOCQ9UIL1 159 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms