RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 POLD4Q9HCU8 107 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 PRMT7Q9NVM4 692 aaPredicted RBP14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 KANSL3Q9P2N6 904 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 PRKAG3Q9UGI9 489 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 STK24Q9Y6E0 443 aa14.06□□□□□ -0.16
NPLOC4-213ENST00000573519 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 CARNS1A5YM72 827 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 C2orf71A6NGG8 1288 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 B4GALT3O60512 393 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 CXCL14O95715 111 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 AKAP5P24588 427 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 CDC25AP30304 524 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 SLC27A1Q6PCB7 646 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 DDX53Q86TM3 631 aaKnown RBP14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 MRPL43Q8N983 215 aaKnown RBP14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 IGSF22Q8N9C0 903 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 SMRP1Q8NCR6 262 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 DEPTORQ8TB45 409 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 BCL7CQ8WUZ0 217 aaPredicted RBP14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 GAD1Q99259 594 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 POP1Q99575 1024 aaKnown RBP14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 C2orf40Q9H1Z8 148 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 NXF3Q9H4D5 531 aaKnown RBP14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 PARP2Q9UGN5 583 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 FAN1Q9Y2M0 1017 aa14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 USP15Q9Y4E8 981 aaPredicted RBP14.05□□□□□ -0.16
NPLOC4-213ENST00000573519 E9PMD0 336 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 EYA4O95677 639 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 ALDH2P05091 517 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 SSBP05455 408 aaKnown RBP eCLIP14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 PRPHP41219 470 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 OR1G1P47890 313 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 SCNN1GP51170 649 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 PRPF4BQ13523 1007 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 PPP2R5AQ15172 486 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 IL17AQ16552 155 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 MAPK6Q16659 721 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 LARP1BQ659C4 914 aaKnown RBP14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 CDCA2Q69YH5 1023 aaPredicted RBP14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 IFT74Q96LB3 600 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 PRIMPOLQ96LW4 560 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 ZFP42Q96MM3 310 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 TMEM175Q9BSA9 504 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 KIFC3Q9BVG8 833 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 ZBP1Q9H171 429 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 DNM3Q9UQ16 869 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 PRG3Q9Y2Y8 225 aaPredicted RBP14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 TTC28Q96AY4 2481 aa14.04□□□□□ -0.16
NPLOC4-213ENST00000573519 A0A1B0GUA9 196 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 VWA3AA6NCI4 1184 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 FAM86C2PA6NEL3 165 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 NRP1O14786 923 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 PRKCBP05771 671 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 CTSAP10619 480 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 COL9A1P20849 921 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 NAMPTP43490 491 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 CUL4AQ13619 759 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 ANKRD54Q6NXT1 300 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 PPP4R3CPQ6ZMV5 832 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 KIFAP3Q92845 792 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 CASP10Q92851 521 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 FOXD4L1Q9NU39 408 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 MIOSQ9NXC5 875 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 KLK14Q9P0G3 267 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 USP20Q9Y2K6 914 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 GIT1Q9Y2X7 761 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 HCFC2Q9Y5Z7 792 aa14.03□□□□□ -0.16
NPLOC4-213ENST00000573519 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 CCDC169A6NNP5 214 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 PI4K2BG5E9Z4 385 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 N4BP3O15049 544 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 NR1I2O75469 434 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 ALADP13716 330 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 KCNC3Q14003 757 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 GIT2Q14161 759 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 TMEM31Q5JXX7 168 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 TMEM184AQ6ZMB5 413 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 RPS6KC1Q96S38 1066 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 PLIN2Q99541 437 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 ADPGKQ9BRR6 497 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 VN1R3Q9BXE9 311 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 FZD8Q9H461 694 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 PDZD7Q9H5P4 517 aa14.02□□□□□ -0.17
NPLOC4-213ENST00000573519 BDP1A6H8Y1 2624 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 VPS37CA5D8V6 355 aaPredicted RBP14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 SPDYE4A6NLX3 237 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 TTLL13PA6NNM8 815 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 C2CD2LO14523 706 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 FAM187BQ17R55 369 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 COLGALT2Q8IYK4 626 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 CDK5RAP3Q96JB5 506 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 RPGRIP1Q96KN7 1286 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 CCDC113Q9H0I3 377 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 SNTG2Q9NY99 539 aa14.01□□□□□ -0.17
NPLOC4-213ENST00000573519 STK39Q9UEW8 545 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms