RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 LILRB3O75022 631 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 CLASP2O75122 1294 aaKnown RBP19.18■□□□□ 0.66
SMG6-212ENST00000573153 ERLIN2O94905 339 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 MAPK7Q13164 816 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 RILPL1Q5EBL4 403 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 HAUS3Q68CZ6 603 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 DDX53Q86TM3 631 aaKnown RBP19.18■□□□□ 0.66
SMG6-212ENST00000573153 MICAL1Q8TDZ2 1067 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 LRRC15Q8TF66 581 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 AUTS2Q8WXX7 1259 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 ZFP42Q96MM3 310 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 GAD1Q99259 594 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 CXCL16Q9H2A7 254 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 ENTPD7Q9NQZ7 604 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 LRWD1Q9UFC0 647 aa19.18■□□□□ 0.66
SMG6-212ENST00000573153 ARL5CA6NH57 179 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 E9PMD0 336 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 F8W810 466 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 POMCP01189 267 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 CTSAP10619 480 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 CCT6AP40227 531 aaKnown RBP19.17■□□□□ 0.66
SMG6-212ENST00000573153 MLH1P40692 756 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 ALDH7A1P49419 539 aaKnown RBP19.17■□□□□ 0.66
SMG6-212ENST00000573153 KRT17Q04695 432 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 HYIQ5T013 277 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 CNNM3Q8NE01 707 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 PNMA5Q96PV4 448 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 TMEM175Q9BSA9 504 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 KIFC3Q9BVG8 833 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 BHMT2Q9H2M3 363 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 PDZD7Q9H5P4 517 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 DDX19AQ9NUU7 478 aaKnown RBP19.17■□□□□ 0.66
SMG6-212ENST00000573153 RAPGEFL1Q9UHV5 662 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 PUF60Q9UHX1 559 aaKnown RBP19.17■□□□□ 0.66
SMG6-212ENST00000573153 CDH22Q9UJ99 828 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 KIAA1024Q9UPX6 916 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 SMC3Q9UQE7 1217 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 HCFC2Q9Y5Z7 792 aa19.17■□□□□ 0.66
SMG6-212ENST00000573153 ARHGEF35A5YM69 484 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 LRRIQ4A6NIV6 560 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 NRP1O14786 923 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 ITGA4P13612 1032 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 NAMPTP43490 491 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 SCNN1GP51170 649 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 SMC1AQ14683 1233 aaKnown RBP19.16■□□□□ 0.66
SMG6-212ENST00000573153 CBX2Q14781 532 aaPredicted RBP19.16■□□□□ 0.66
SMG6-212ENST00000573153 PTPN14Q15678 1187 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 EEF1DP3Q658K8 133 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 ANKRD54Q6NXT1 300 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 TMC7Q7Z402 723 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 VPS52Q8N1B4 723 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 SNX29Q8TEQ0 813 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 TMEM169Q96HH4 297 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 PRIMPOLQ96LW4 560 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 CCDC43Q96MW1 224 aaKnown RBP19.16■□□□□ 0.66
SMG6-212ENST00000573153 RUSC1Q9BVN2 902 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 RAB34Q9BZG1 259 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 GBP3Q9H0R5 595 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 PRMT7Q9NVM4 692 aaPredicted RBP19.16■□□□□ 0.66
SMG6-212ENST00000573153 ZMYM2Q9UBW7 1377 aa19.16■□□□□ 0.66
SMG6-212ENST00000573153 LOC730098B7Z3J9 87 aa19.15■□□□□ 0.66
SMG6-212ENST00000573153 NPTXRO95502 500 aa19.15■□□□□ 0.66
SMG6-212ENST00000573153 NAB2Q15742 525 aa19.15■□□□□ 0.66
SMG6-212ENST00000573153 SLC27A1Q6PCB7 646 aa19.15■□□□□ 0.66
SMG6-212ENST00000573153 TAS1R3Q7RTX0 852 aa19.15■□□□□ 0.66
SMG6-212ENST00000573153 SLC22A17Q8WUG5 538 aa19.15■□□□□ 0.66
SMG6-212ENST00000573153 GIT1Q9Y2X7 761 aa19.15■□□□□ 0.66
SMG6-212ENST00000573153 TDRD15B5MCY1 1934 aaKnown RBP19.15■□□□□ 0.66
SMG6-212ENST00000573153 CARNS1A5YM72 827 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 H3BQV1 296 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 AKAP5P24588 427 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 NT5DC1Q5TFE4 455 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 MCTP1Q6DN14 999 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 C1orf186Q6ZWK4 172 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 URGCPQ8TCY9 931 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 LRFN3Q9BTN0 628 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 C1QTNF1Q9BXJ1 281 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 UBN1Q9NPG3 1134 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 FAM50BQ9Y247 325 aa19.14■□□□□ 0.65
SMG6-212ENST00000573153 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
SMG6-212ENST00000573153 ACKR2O00590 384 aa19.13■□□□□ 0.65
SMG6-212ENST00000573153 PTGESO14684 152 aa19.13■□□□□ 0.65
SMG6-212ENST00000573153 GPR37L1O60883 481 aa19.13■□□□□ 0.65
SMG6-212ENST00000573153 SSTR3P32745 418 aaPredicted RBP19.13■□□□□ 0.65
SMG6-212ENST00000573153 RNASELQ05823 741 aaKnown RBP19.13■□□□□ 0.65
SMG6-212ENST00000573153 LARP1BQ659C4 914 aaKnown RBP19.13■□□□□ 0.65
SMG6-212ENST00000573153 LLGL2Q6P1M3 1020 aa19.13■□□□□ 0.65
SMG6-212ENST00000573153 TAS1R1Q7RTX1 841 aa19.13■□□□□ 0.65
SMG6-212ENST00000573153 KANSL3Q9P2N6 904 aa19.13■□□□□ 0.65
SMG6-212ENST00000573153 DENND4AQ7Z401 1863 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 FAM86C2PA6NEL3 165 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 ABLIM1O14639 778 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 CXCL14O95715 111 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 PRKCBP05771 671 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 EPCAMP16422 314 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 COL9A1P20849 921 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 GRIN1Q05586 938 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 TMEM119Q4V9L6 283 aa19.12■□□□□ 0.65
SMG6-212ENST00000573153 ARL6IP4Q66PJ3 421 aaKnown RBP19.12■□□□□ 0.65
SMG6-212ENST00000573153 RINT1Q6NUQ1 792 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms