RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SLC39A11Q8N1S5 342 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 GSTCDQ8NEC7 633 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 ATXN2LQ8WWM7 1075 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 SYMPKQ92797 1274 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 HLA-CQ95604 372 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 CDK5RAP3Q96JB5 506 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 CHAMP1Q96JM3 812 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 IFT74Q96LB3 600 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 ZFP42Q96MM3 310 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 ZNF558Q96NG5 402 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 GAD1Q99259 594 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 NT5C3AQ9H0P0 336 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 GBP3Q9H0R5 595 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 C2orf40Q9H1Z8 148 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 PDZD7Q9H5P4 517 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 IGFLR1Q9H665 355 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 AAASQ9NRG9 546 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 KLK14Q9P0G3 267 aa11.3□□□□□ -0.6
GTF3C1-213ENST00000571886 DLL1O00548 723 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 ACKR2O00590 384 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 FSCN2O14926 492 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 PER2O15055 1255 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 SLC16A4O15374 487 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 F13A1P00488 732 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 HSP90AA1P07900 732 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 ZSCAN22P10073 491 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 BMP1P13497 986 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 LTBRP36941 435 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 MLH1P40692 756 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 SLC11A1P49279 550 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 NASPP49321 788 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 MRPS5P82675 430 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 RBM10P98175 930 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 PLCB3Q01970 1234 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 NCBP1Q09161 790 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 PRPF4BQ13523 1007 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 PPP2R5AQ15172 486 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 MAPK6Q16659 721 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 TIGD5Q53EQ6 642 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 SLC27A1Q6PCB7 646 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 RBM23Q86U06 439 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 LINC00301Q8NCQ3 95 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 MRPS27Q92552 414 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 RAD54LQ92698 747 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 CCDC51Q96ER9 411 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 CALML4Q96GE6 196 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 PRIMPOLQ96LW4 560 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 VN1R3Q9BXE9 311 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 PANK2Q9BZ23 570 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 UBE2ZQ9H832 354 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 KMT5AQ9NQR1 393 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 SNTG2Q9NY99 539 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 SPG21Q9NZD8 308 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 ARHGAP28Q9P2N2 729 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 CACNG4Q9UBN1 327 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 ZDHHC9Q9Y397 364 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 VCANP13611 3396 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 CNTNAP2Q9UHC6 1331 aa11.29□□□□□ -0.6
GTF3C1-213ENST00000571886 ARL5CA6NH57 179 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 HIDE1A8MVS5 230 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 F8W810 466 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 K7ERI5 159 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 SLC26A4O43511 780 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 DDIT3P35638 169 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 SCNN1GP51170 649 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 GIT2Q14161 759 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 COL19A1Q14993 1142 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 CTC1Q2NKJ3 1217 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 TJAP1Q5JTD0 557 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 PLPP4Q5VZY2 271 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 EP400NLQ6ZTU2 488 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 GPBP1Q86WP2 473 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 COLGALT2Q8IYK4 626 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 CNNM3Q8NE01 707 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 RABGGTAQ92696 567 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 ZBTB45Q96K62 511 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 NECAB3Q96P71 396 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 ACO2Q99798 780 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 REEP2Q9BRK0 252 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 NTPCRQ9BSD7 190 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 MRPL9Q9BYD2 267 aaKnown RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 TRIM6Q9C030 488 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 TMEM134Q9H6X4 195 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 TLR9Q9NR96 1032 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 DAXXQ9UER7 740 aaPredicted RBP11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 PARP2Q9UGN5 583 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 COG5Q9UP83 839 aa11.28□□□□□ -0.6
GTF3C1-213ENST00000571886 TCHHQ07283 1943 aa11.27□□□□□ -0.6
GTF3C1-213ENST00000571886 H3BQ06 376 aaPredicted RBP11.27□□□□□ -0.61
GTF3C1-213ENST00000571886 NRP1O14786 923 aa11.27□□□□□ -0.61
GTF3C1-213ENST00000571886 N4BP3O15049 544 aa11.27□□□□□ -0.61
GTF3C1-213ENST00000571886 INPPL1O15357 1258 aa11.27□□□□□ -0.61
GTF3C1-213ENST00000571886 PLS3P13797 630 aa11.27□□□□□ -0.61
GTF3C1-213ENST00000571886 KCNA5P22460 613 aa11.27□□□□□ -0.61
GTF3C1-213ENST00000571886 NRIP1P48552 1158 aa11.27□□□□□ -0.61
GTF3C1-213ENST00000571886 ALDH7A1P49419 539 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms