RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PASD1Q8IV76 773 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SYT2Q8N9I0 419 aaPredicted RBP11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 RAPGEF5Q92565 580 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 CYP26A1O43174 497 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 RTN2O75298 545 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 CYP11B2P19099 503 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 SLC20A2Q08357 652 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 MAP7Q14244 749 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
PCDHGA4-201ENST00000571252 CRKP46108 304 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 GPSM2P81274 684 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 IZUMO3Q5VZ72 239 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 KRT39Q6A163 491 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 PTF1AQ7RTS3 328 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 SPATA20Q8TB22 786 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 TTC17Q96AE7 1141 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 GRAMD1AQ96CP6 724 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 LXNQ9BS40 222 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 JMJD4Q9H9V9 463 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 STOML1Q9UBI4 398 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 BCAP29Q9UHQ4 241 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 IPO5O00410 1097 aaKnown RBP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 DIAPH2O60879 1101 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 FAM153BP0C7A2 387 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 PDE1BQ01064 536 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 NFIXQ14938 502 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 GEN1Q17RS7 908 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 FAM153CQ494X1 144 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 MEI1Q5TIA1 1274 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 MAML1Q92585 1016 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 HSD3B7Q9H2F3 369 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 FGFR1OP2Q9NVK5 253 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 FAM153AQ9UHL3 310 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 ZFP69BQ9UJL9 534 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 MAP3K7O43318 606 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 CDH16O75309 829 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 SPAG7O75391 227 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 PDHA1P08559 390 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 RPA1P27694 616 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 MKRN3Q13064 507 aaKnown RBP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 TRMT10CQ7L0Y3 403 aaKnown RBP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 HACE1Q8IYU2 909 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 RBM41Q96IZ5 413 aaKnown RBP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 PABPC3Q9H361 631 aaKnown RBP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 GOLGA8MH3BSY2 632 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 CLDN3O15551 220 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 MYBL2P10244 700 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 MTERF2Q49AM1 385 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 ZC2HC1CQ53FD0 456 aaPredicted RBP11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 SMC1BQ8NDV3 1235 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 C9orf72Q96LT7 481 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 TTC25Q96NG3 672 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 DAGLAQ9Y4D2 1042 aa11.87□□□□□ -0.51
PCDHGA4-201ENST00000571252 RNF225M0QZC1 329 aaPredicted RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 KIF1CO43896 1103 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 AMPD2Q01433 879 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 CAPRIN2Q6IMN6 1127 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 FAM160B2Q86V87 743 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 TSC22D3Q99576 134 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 NXF1Q9UBU9 619 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 PKD1L3Q7Z443 1732 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 TMEM120BA0PK00 339 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 NOL3O60936 208 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 COMTP21964 271 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 RAD23BP54727 409 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 ARL4CP56559 192 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 TFAMQ00059 246 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 RINT1Q6NUQ1 792 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 DARS2Q6PI48 645 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 BARGINQ6ZT62 677 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 ZNF507Q8TCN5 953 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 CDKL2Q92772 493 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 MIS12Q9H081 205 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 SPATA31A5Q5VU36 1347 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 SPATA31A7Q8IWB4 1347 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 ABCC6O95255 1503 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 IQANK1A0A1B0GTG1 560 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 TBX3O15119 743 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 P4HBP07237 508 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 SCP2P22307 547 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 PON1P27169 355 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 PBX1P40424 430 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 KIF22Q14807 665 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 ZNF394Q53GI3 561 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 HAUS6Q7Z4H7 955 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 ATL2Q8NHH9 583 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 NUDCD1Q96RS6 583 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 VCPKMTQ9H867 229 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 ADAMTS7Q9UKP4 1686 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 DENND3A2RUS2 1198 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 LMNAP02545 664 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 YARSP54577 528 aaKnown RBP11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 GPS1Q13098 491 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 STAT4Q14765 748 aa11.86□□□□□ -0.51
PCDHGA4-201ENST00000571252 PLCB4Q15147 1175 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms