RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 PTENP60484 403 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 GIT2Q14161 759 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 KIAA1841Q6NSI8 718 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 SPATA31D4Q6ZUB0 917 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 GPR149Q86SP6 731 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 SLFN12Q8IYM2 578 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 FAM177A1Q8N128 213 aaPredicted RBP9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 PIGOQ8TEQ8 1089 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 TCP11Q8WWU5 503 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 B3GALT6Q96L58 329 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 EMILIN2Q9BXX0 1053 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 MRPL17Q9NRX2 175 aaKnown RBP9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 MARCH5Q9NX47 278 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 KLK14Q9P0G3 267 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 KANSL3Q9P2N6 904 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 CACNG4Q9UBN1 327 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 PCDHA12Q9UN75 941 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 IPPQ9Y573 584 aa9.59□□□□□ -0.87
CTDNEP1-203ENST00000570385 ARL5CA6NH57 179 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 BTBD18B2RXH4 712 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 ASAP2O43150 1006 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 B4GALT5O43286 388 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 JAK2O60674 1132 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 LILRB3O75022 631 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 URODP06132 367 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 NCLP19338 710 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 SCNN1GP51170 649 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 GUCY1B3Q02153 619 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 CAPSQ13938 189 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 CALCRLQ16602 461 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 ME3Q16798 604 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 PPFIBP1Q86W92 1011 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 GLYCTKQ8IVS8 523 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 EXOC8Q8IYI6 725 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 COLGALT2Q8IYK4 626 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 UBALD2Q8IYN6 164 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 ZDHHC14Q8IZN3 488 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 TMEM105Q8N8V8 129 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 ST13P5Q8NFI4 369 aaPredicted RBP9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 TNFRSF25Q93038 417 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 CCDC43Q96MW1 224 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 NAP1L4Q99733 375 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 PRRX2Q99811 253 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 TMEM175Q9BSA9 504 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 MFSD1Q9H3U5 465 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 NXF3Q9H4D5 531 aaKnown RBP9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 TTC12Q9H892 705 aaPredicted RBP9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 SFXN1Q9H9B4 322 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 GPRC5CQ9NQ84 441 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 MAN1C1Q9NR34 630 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 FAM186AA6NE01 2351 aa9.58□□□□□ -0.88
CTDNEP1-203ENST00000570385 CNTNAP2Q9UHC6 1331 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 POTEMA6NI47 508 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 TEX28O15482 410 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 GAS2O43903 313 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 GFRA3O60609 400 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 USO1O60763 962 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 RFPL2O75678 378 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 NPTXRO95502 500 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 SOD2P04179 222 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 ARF4P18085 180 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 GLRA2P23416 452 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 ARL2P36404 184 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 MBTD1Q05BQ5 628 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 NCBP1Q09161 790 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 TFDP1Q14186 410 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 MXD4Q14582 209 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 AMHR2Q16671 573 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 NOTUMQ6P988 496 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 CCDC149Q6ZUS6 474 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 PALB2Q86YC2 1186 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 DIS3L2Q8IYB7 885 aaKnown RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 FLCNQ8NFG4 579 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 RSAD2Q8WXG1 361 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 RSPH1Q8WYR4 309 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 WASF1Q92558 559 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 ACSF2Q96CM8 615 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 RPS6KC1Q96S38 1066 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 HSD17B14Q9BPX1 270 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 TRIM6Q9C030 488 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 CSRNP2Q9H175 543 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 POLR3FQ9H1D9 316 aaPredicted RBP9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 TMEM60Q9H2L4 133 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 BRMS1Q9HCU9 246 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 PARP2Q9UGN5 583 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 USP20Q9Y2K6 914 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 PPME1Q9Y570 386 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 C2orf16Q68DN1 1984 aa9.57□□□□□ -0.88
CTDNEP1-203ENST00000570385 DOCK6Q96HP0 2047 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 CCDC195A0A1B0GUA6 201 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 CARNS1A5YM72 827 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 LRRIQ4A6NIV6 560 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 INPPL1O15357 1258 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 NARSO43776 548 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 NEMFO60524 1076 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 ADH1AP07327 375 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 RPL17P18621 184 aaKnown RBP9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 LIG1P18858 919 aa9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 GBP2P32456 591 aaPredicted RBP9.56□□□□□ -0.88
CTDNEP1-203ENST00000570385 MCM7P33993 719 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms