RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 TIGD5Q53EQ6 642 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 ARSHQ5FYA8 562 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 ATL3Q6DD88 541 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 KCNT2Q6UVM3 1135 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 CDR2LQ86X02 465 aaPredicted RBP15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 THNSL1Q8IYQ7 743 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 HACE1Q8IYU2 909 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 URGCPQ8TCY9 931 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 LRRC15Q8TF66 581 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 POF1BQ8WVV4 589 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 LARP4BQ92615 738 aaKnown RBP15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 RAD54LQ92698 747 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 ZNF558Q96NG5 402 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 TMEM134Q9H6X4 195 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 KMT5AQ9NQR1 393 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 PRDM6Q9NQX0 595 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 KANSL3Q9P2N6 904 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 INPP5FQ9Y2H2 1132 aa15.23■□□□□ 0.03
HERPUD1-218ENST00000569569 CARNS1A5YM72 827 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 FGF18O76093 207 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 NPTXRO95502 500 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 PLS3P13797 630 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 PPM1AP35813 382 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 ALDH7A1P49419 539 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 SMTNP53814 917 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 PLCB3Q01970 1234 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 RNASELQ05823 741 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 CAMK1Q14012 370 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 MCM6Q14566 821 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 RRAGBQ5VZM2 374 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 GPBP1Q86WP2 473 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 SPIRE2Q8WWL2 714 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 ADPGKQ9BRR6 497 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 NSUN3Q9H649 340 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 TBC1D13Q9NVG8 400 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 LARSQ9P2J5 1176 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 ARHGAP28Q9P2N2 729 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 STK17AQ9UEE5 414 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 CFAP45Q9UL16 551 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 ODF2LQ9ULJ1 636 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 GIT1Q9Y2X7 761 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 HES2Q9Y543 173 aa15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 TCF20Q9UGU0 1960 aaKnown RBP15.22■□□□□ 0.03
HERPUD1-218ENST00000569569 NPHP3-ACAD11A0A0J9YXS1 232 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 ABCB7O75027 752 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 DNAJB1P25685 340 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 BCAR1P56945 870 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 FOXD4L6Q3SYB3 417 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 FOXD4L3Q6VB84 417 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 CCDC73Q6ZRK6 1079 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 FAM193BQ96PV7 902 aaPredicted RBP15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 NXF3Q9H4D5 531 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 PDZD7Q9H5P4 517 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 NRDE2Q9H7Z3 1164 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 SPG21Q9NZD8 308 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 THEGQ9P2T0 379 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 PUF60Q9UHX1 559 aaKnown RBP15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 COG5Q9UP83 839 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 LZTS1Q9Y250 596 aa15.21■□□□□ 0.03
HERPUD1-218ENST00000569569 SPTBN5Q9NRC6 3674 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 INPPL1O15357 1258 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 SLC16A4O15374 487 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 BRD1O95696 1058 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 EDN1P05305 212 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 KRT18P05783 430 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 KRT17Q04695 432 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 GIT2Q14161 759 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 TCEAL5Q5H9L2 206 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 NT5DC1Q5TFE4 455 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 ATF7IP2Q5U623 682 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 SLC39A11Q8N1S5 342 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 GAD1Q99259 594 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 REEP2Q9BRK0 252 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 APOL6Q9BWW8 343 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 PARP2Q9UGN5 583 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 USP20Q9Y2K6 914 aa15.2■□□□□ 0.02
HERPUD1-218ENST00000569569 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 NT5C1B-RDH14C9J2C7 533 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 H0YCG3 227 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 CUTAO60888 179 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 FAM13AO94988 1023 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 POMCP01189 267 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 GALTP07902 379 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 AKAP5P24588 427 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 PBX3P40426 434 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 AFF1P51825 1210 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 PDE12Q6L8Q7 609 aaKnown RBP15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 SV2BQ7L1I2 683 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 TAS1R3Q7RTX0 852 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 APBB1IPQ7Z5R6 666 aaPredicted RBP15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 ZNF280BQ86YH2 543 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 MYCT1Q8N699 235 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 TMEM161BQ8NDZ6 487 aa15.19■□□□□ 0.02
HERPUD1-218ENST00000569569 KCNG4Q8TDN1 519 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms