RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 TMEM169Q96HH4 297 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 IGSF21Q96ID5 467 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 MSLNLQ96KJ4 702 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 PRIMPOLQ96LW4 560 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 GAD1Q99259 594 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 KIFC3Q9BVG8 833 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 TRIM6Q9C030 488 aaPredicted RBP22.27■■□□□ 1.16
ABCA3-206ENST00000569062 C2orf40Q9H1Z8 148 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 NGRNQ9NPE2 291 aaKnown RBP22.27■■□□□ 1.16
ABCA3-206ENST00000569062 UBN1Q9NPG3 1134 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 BARX2Q9UMQ3 279 aaPredicted RBP22.27■■□□□ 1.16
ABCA3-206ENST00000569062 USP20Q9Y2K6 914 aa22.27■■□□□ 1.16
ABCA3-206ENST00000569062 ARL5CA6NH57 179 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 MBTPS2O43462 519 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 MLH1P40692 756 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 FAM187BQ17R55 369 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 ARL6IP4Q66PJ3 421 aaKnown RBP22.26■■□□□ 1.15
ABCA3-206ENST00000569062 DEPTORQ8TB45 409 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 KIFAP3Q92845 792 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 PNMA5Q96PV4 448 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 RUSC1Q9BVN2 902 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 CCDC113Q9H0I3 377 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 MIOSQ9NXC5 875 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 KANSL3Q9P2N6 904 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 CD207Q9UJ71 328 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 GTF3C3Q9Y5Q9 886 aa22.26■■□□□ 1.15
ABCA3-206ENST00000569062 PRKCBP05771 671 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 LIG1P18858 919 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 AKAP5P24588 427 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 PPP2R5AQ15172 486 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 HYIQ5T013 277 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 RINT1Q6NUQ1 792 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 BRAPQ7Z569 592 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 IFT74Q96LB3 600 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 ZFP42Q96MM3 310 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 FAM193BQ96PV7 902 aaPredicted RBP22.25■■□□□ 1.15
ABCA3-206ENST00000569062 PLIN2Q99541 437 aa22.25■■□□□ 1.15
ABCA3-206ENST00000569062 CDCA3Q99618 268 aaPredicted RBP22.25■■□□□ 1.15
ABCA3-206ENST00000569062 C2orf71A6NGG8 1288 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 INPPL1O15357 1258 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 SCNN1GP51170 649 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 PRPF4BQ13523 1007 aaKnown RBP22.24■■□□□ 1.15
ABCA3-206ENST00000569062 KCNC3Q14003 757 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 SMC1AQ14683 1233 aaKnown RBP22.24■■□□□ 1.15
ABCA3-206ENST00000569062 MAPK6Q16659 721 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 DDX53Q86TM3 631 aaKnown RBP22.24■■□□□ 1.15
ABCA3-206ENST00000569062 DAW1Q8N136 415 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 VPS52Q8N1B4 723 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 MRPL43Q8N983 215 aaKnown RBP22.24■■□□□ 1.15
ABCA3-206ENST00000569062 VN1R3Q9BXE9 311 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 ZBP1Q9H171 429 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 PDZD7Q9H5P4 517 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 FOXD4L1Q9NU39 408 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 FAM50BQ9Y247 325 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 GIT1Q9Y2X7 761 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 MYH11P35749 1972 aa22.24■■□□□ 1.15
ABCA3-206ENST00000569062 CARNS1A5YM72 827 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 ACKR2O00590 384 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 HIP1RO75146 1068 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 PDCP20941 246 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 CA8P35219 290 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 SMAD4Q13485 552 aaKnown RBP22.23■■□□□ 1.15
ABCA3-206ENST00000569062 SF3A1Q15459 793 aaKnown RBP22.23■■□□□ 1.15
ABCA3-206ENST00000569062 SMAD2Q15796 467 aaKnown RBP22.23■■□□□ 1.15
ABCA3-206ENST00000569062 C1orf186Q6ZWK4 172 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 COLGALT2Q8IYK4 626 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 AUTS2Q8WXX7 1259 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 KHSRPQ92945 711 aaKnown RBP eCLIP22.23■■□□□ 1.15
ABCA3-206ENST00000569062 TMEM175Q9BSA9 504 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 KLK14Q9P0G3 267 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 FAN1Q9Y2M0 1017 aa22.23■■□□□ 1.15
ABCA3-206ENST00000569062 K7ELQ4 463 aaPredicted RBP22.22■■□□□ 1.15
ABCA3-206ENST00000569062 NRP1O14786 923 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 N4BP3O15049 544 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 CXCL14O95715 111 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 ALDH2P05091 517 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 SYT1P21579 422 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 PEX3P56589 373 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 GRIN1Q05586 938 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 COASYQ13057 564 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 MAPK7Q13164 816 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 TMEM132AQ24JP5 1023 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 LLGL2Q6P1M3 1020 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 CABP7Q86V35 215 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 HACE1Q8IYU2 909 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 GJD3Q8N144 294 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 SMRP1Q8NCR6 262 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 GSTCDQ8NEC7 633 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 INTS4Q96HW7 963 aaKnown RBP22.22■■□□□ 1.15
ABCA3-206ENST00000569062 NT5C3AQ9H0P0 336 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 PARP2Q9UGN5 583 aa22.22■■□□□ 1.15
ABCA3-206ENST00000569062 SSBP05455 408 aaKnown RBP eCLIP22.21■■□□□ 1.15
ABCA3-206ENST00000569062 NPTX2P47972 431 aa22.21■■□□□ 1.15
ABCA3-206ENST00000569062 TMEM119Q4V9L6 283 aa22.21■■□□□ 1.15
ABCA3-206ENST00000569062 EEF1DP3Q658K8 133 aa22.21■■□□□ 1.15
ABCA3-206ENST00000569062 SYT2Q8N9I0 419 aaPredicted RBP22.21■■□□□ 1.15
ABCA3-206ENST00000569062 CDK5RAP3Q96JB5 506 aa22.21■■□□□ 1.15
ABCA3-206ENST00000569062 MARCH5Q9NX47 278 aa22.21■■□□□ 1.15
ABCA3-206ENST00000569062 PRG3Q9Y2Y8 225 aaPredicted RBP22.21■■□□□ 1.15
ABCA3-206ENST00000569062 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms