RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 APOBEC3HQ6NTF7 200 aaKnown RBP23.17■■□□□ 1.3
DENND4A-208ENST00000568515 ZNF746Q6NUN9 644 aaPredicted RBP23.17■■□□□ 1.3
DENND4A-208ENST00000568515 CCDC25Q86WR0 208 aa23.17■■□□□ 1.3
DENND4A-208ENST00000568515 SLC13A5Q86YT5 568 aaPredicted RBP23.17■■□□□ 1.3
DENND4A-208ENST00000568515 CD2APQ9Y5K6 639 aa23.17■■□□□ 1.3
DENND4A-208ENST00000568515 PASKQ96RG2 1323 aa23.17■■□□□ 1.3
DENND4A-208ENST00000568515 RTN2O75298 545 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 UBOX5O94941 541 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 KCNJ1P48048 391 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 SYDE2Q5VT97 1194 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 FAM196AQ6ZSG2 479 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 SLC9A9Q8IVB4 645 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 ARHGEF19Q8IW93 802 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 MORC4Q8TE76 937 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 CD101Q93033 1021 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 RARAP10276 462 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 ACCSLQ4AC99 568 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 TRMT10CQ7L0Y3 403 aaKnown RBP23.16■■□□□ 1.3
DENND4A-208ENST00000568515 SYCP3Q8IZU3 236 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 DYDC1Q8WWB3 177 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 USP15Q9Y4E8 981 aaPredicted RBP23.16■■□□□ 1.3
DENND4A-208ENST00000568515 MTA2O94776 668 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 SCP2P22307 547 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 ZNF268Q14587 947 aaPredicted RBP23.16■■□□□ 1.3
DENND4A-208ENST00000568515 LRRC14Q15048 493 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 LRCH2Q5VUJ6 765 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 WDR18Q9BV38 432 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 BCS1LQ9Y276 419 aa23.16■■□□□ 1.3
DENND4A-208ENST00000568515 PSMD10O75832 226 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 DLG4P78352 724 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 SIX1Q15475 284 aaPredicted RBP23.15■■□□□ 1.3
DENND4A-208ENST00000568515 LONRF1Q17RB8 773 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 ZNF568Q3ZCX4 644 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 VTI1AQ96AJ9 217 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 EMSYQ7Z589 1322 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 SERPINB2P05120 415 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 RPSAP08865 295 aaKnown RBP23.15■■□□□ 1.3
DENND4A-208ENST00000568515 NQO1P15559 274 aaKnown RBP23.15■■□□□ 1.3
DENND4A-208ENST00000568515 HOXA10P31260 410 aaPredicted RBP23.15■■□□□ 1.3
DENND4A-208ENST00000568515 GBP2P32456 591 aaPredicted RBP23.15■■□□□ 1.3
DENND4A-208ENST00000568515 CLNS1AP54105 237 aaKnown RBP23.15■■□□□ 1.3
DENND4A-208ENST00000568515 NCALDP61601 193 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 ICA1Q05084 483 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 CALCOCO2Q13137 446 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 HHIPL2Q6UWX4 724 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 BANK1Q8NDB2 785 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 MGARPQ8TDB4 240 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 TEKT1Q969V4 418 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 STAMBPL1Q96FJ0 436 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 PCDHB18PQ96TA0 734 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 EBF2Q9HAK2 575 aa23.15■■□□□ 1.3
DENND4A-208ENST00000568515 TCP11X1B4DZS4 312 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 PPP2R5CQ13362 524 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 ARHGEF2Q92974 986 aaKnown RBP23.14■■□□□ 1.29
DENND4A-208ENST00000568515 DDX23Q9BUQ8 820 aaKnown RBP23.14■■□□□ 1.29
DENND4A-208ENST00000568515 CDC42EP4Q9H3Q1 356 aaKnown RBP23.14■■□□□ 1.29
DENND4A-208ENST00000568515 FGFR1OP2Q9NVK5 253 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 GGT7Q9UJ14 662 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 NDUFB10O96000 172 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 KCNJ2P63252 427 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 GALNTL6Q49A17 601 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 OTUD6AQ7L8S5 288 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 CPNE8Q86YQ8 564 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 CCHCR1Q8TD31 782 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 NACC1Q96RE7 527 aa23.14■■□□□ 1.29
DENND4A-208ENST00000568515 QSER1Q2KHR3 1735 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 ATMINO43313 823 aaPredicted RBP23.13■■□□□ 1.29
DENND4A-208ENST00000568515 CETN1Q12798 172 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 CRYMQ14894 314 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 MIGA2Q7L4E1 593 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 GMCL1Q96IK5 515 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 SERPINB12Q96P63 405 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 ECT2Q9H8V3 914 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 TMEM120BA0PK00 339 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 SPOPO43791 374 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 SUN1O94901 812 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 SGPL1O95470 568 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 ECEL1O95672 775 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 CHRNB2P17787 502 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 PRELPP51888 382 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 PPP3CAQ08209 521 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 TCP10Q12799 353 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 MYBPC2Q14324 1141 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 C12orf50Q8NA57 414 aaPredicted RBP23.13■■□□□ 1.29
DENND4A-208ENST00000568515 CRAMP1Q96RY5 1269 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 POP1Q99575 1024 aaKnown RBP23.13■■□□□ 1.29
DENND4A-208ENST00000568515 STRA6Q9BX79 667 aa23.13■■□□□ 1.29
DENND4A-208ENST00000568515 WRAP73Q9P2S5 460 aaPredicted RBP23.13■■□□□ 1.29
DENND4A-208ENST00000568515 ADAMTSL1Q8N6G6 1762 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 TAF1LQ8IZX4 1826 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 A0A1B0GUA9 196 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 PIK3CDO00329 1044 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 ACSL3O95573 720 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 CREB1P16220 341 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 RNF207Q6ZRF8 634 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 GMCL1P1Q8NEA9 526 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 BTBD6Q96KE9 485 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 LRRC19Q9H756 370 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 AAASQ9NRG9 546 aa23.12■■□□□ 1.29
DENND4A-208ENST00000568515 KCND2Q9NZV8 630 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms