RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 CORO1CQ9ULV4 474 aaPredicted RBP11.64□□□□□ -0.55
PALB2-206ENST00000568219 CYP26A1O43174 497 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 COILP38432 576 aaPredicted RBP11.64□□□□□ -0.55
PALB2-206ENST00000568219 CACNA2D1P54289 1103 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 KCNA1Q09470 495 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 SMAD1Q15797 465 aaKnown RBP11.64□□□□□ -0.55
PALB2-206ENST00000568219 MFSD14BQ5SR56 506 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 IZUMO3Q5VZ72 239 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 CADPS2Q86UW7 1296 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 CCDC110Q8TBZ0 833 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 TRIM55Q9BYV6 548 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 IL17RBQ9NRM6 502 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 SLAIN2Q9P270 581 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 ZNF804BA4D1E1 1349 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 SPDYE5A6NIY4 337 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 NOL4O94818 638 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 ARFIP2P53365 341 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 BFSP1Q12934 665 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 C12orf60Q5U649 245 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 ZNF804AQ7Z570 1209 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 CCDC89Q8N998 374 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 ANKRD2Q9GZV1 360 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 INTS2Q9H0H0 1204 aaKnown RBP11.64□□□□□ -0.55
PALB2-206ENST00000568219 ACP6Q9NPH0 428 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 NAALADL1Q9UQQ1 740 aa11.64□□□□□ -0.55
PALB2-206ENST00000568219 UFL1O94874 794 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 ETS2P15036 469 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 FGFR2P21802 821 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 CRKLP46109 303 aaKnown RBP11.63□□□□□ -0.55
PALB2-206ENST00000568219 YWHAGP61981 247 aaKnown RBP eCLIP11.63□□□□□ -0.55
PALB2-206ENST00000568219 NBPF20Q3BBV1 942 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 VGLL2Q8N8G2 317 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 SLC20A1Q8WUM9 679 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 SPOCK2Q92563 424 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 CFAP57Q96MR6 1250 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 AGPAT1Q99943 283 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 MMTAG2Q9BU76 263 aaKnown RBP11.63□□□□□ -0.55
PALB2-206ENST00000568219 RNPEPL1Q9HAU8 725 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 CYP4F11Q9HBI6 524 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 SLIT1O75093 1534 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 PEAK1Q9H792 1746 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.63□□□□□ -0.55
PALB2-206ENST00000568219 CCDC195A0A1B0GUA6 201 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 KIAA0391O15091 583 aaKnown RBP11.63□□□□□ -0.55
PALB2-206ENST00000568219 MT-ND3P03897 115 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 ENO1P06733 434 aaKnown RBP11.63□□□□□ -0.55
PALB2-206ENST00000568219 PYGMP11217 842 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 MMP13P45452 471 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 CASP5P51878 434 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 USP4Q13107 963 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 TPTE2Q6XPS3 522 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 FRMD5Q7Z6J6 570 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 LRRC15Q8TF66 581 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 STK32AQ8WU08 396 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 ALG3Q92685 438 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 TBC1D10AQ9BXI6 508 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 ANAPC4Q9UJX5 808 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 ZNF711Q9Y462 761 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 SPATA31A3Q5VYP0 1347 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 GAS7O60861 476 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 SCNN1DP51172 638 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 PSMC6P62333 389 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 PPP4R3CPQ6ZMV5 832 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 CEP120Q8N960 986 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 ZMYND8Q9ULU4 1186 aaPredicted RBP11.63□□□□□ -0.55
PALB2-206ENST00000568219 SIGLEC1Q9BZZ2 1709 aa11.63□□□□□ -0.55
PALB2-206ENST00000568219 ZBED4O75132 1171 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 IL6STP40189 918 aaPredicted RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 PDIA5Q14554 519 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 PRUNE1Q86TP1 453 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 SLC25A41Q8N5S1 370 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 MAGEC3Q8TD91 643 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 SNF8Q96H20 258 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 THTPAQ9BU02 230 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 SHCBP1LQ9BZQ2 653 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 DIS3Q9Y2L1 958 aaKnown RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 SPATA31D1Q6ZQQ2 1576 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 ITSN1Q15811 1721 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 TTLL1O95922 423 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 CYP11B2P19099 503 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 CD58P19256 250 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 VHLP40337 213 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 PEX5P50542 639 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 BTKQ06187 659 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 GPS1Q13098 491 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 ZNF268Q14587 947 aaPredicted RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 PDCD2Q16342 344 aaPredicted RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 TMCO4Q5TGY1 634 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 LVRNQ6Q4G3 990 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 TRMT10CQ7L0Y3 403 aaKnown RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 IRF2BP2Q7Z5L9 587 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 SLF2Q8IX21 1173 aa11.62□□□□□ -0.55
PALB2-206ENST00000568219 SCG3Q8WXD2 468 aaKnown RBP11.62□□□□□ -0.55
PALB2-206ENST00000568219 MXD3Q9BW11 206 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms