RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 DOCK6Q96HP0 2047 aa7.66□□□□□ -1.18
SF3B3-209ENST00000567635 C2orf71A6NGG8 1288 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 ARL5CA6NH57 179 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 HIDE1A8MVS5 230 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 B4GALT5O43286 388 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 MBTPS2O43462 519 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 DDHD2O94830 711 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 EYA4O95677 639 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 GLP2RO95838 553 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 SRGAP2BP0DMP2 458 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 NAMPTP43490 491 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 SLC11A1P49279 550 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 AFF1P51825 1210 aaKnown RBP7.65□□□□□ -1.18
SF3B3-209ENST00000567635 ATP2C1P98194 919 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-209ENST00000567635 SMAD4Q13485 552 aaKnown RBP7.65□□□□□ -1.18
SF3B3-209ENST00000567635 SMC1AQ14683 1233 aaKnown RBP7.65□□□□□ -1.18
SF3B3-209ENST00000567635 PPP2R5AQ15172 486 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 SMAD2Q15796 467 aaKnown RBP7.65□□□□□ -1.18
SF3B3-209ENST00000567635 FAM187BQ17R55 369 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 SLC27A1Q6PCB7 646 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 TMEM184AQ6ZMB5 413 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 ZBTB8OSQ8IWT0 167 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 ADHFE1Q8IWW8 467 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 HACE1Q8IYU2 909 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 VPS52Q8N1B4 723 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 TMEM87AQ8NBN3 555 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 DEPTORQ8TB45 409 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 SNX29Q8TEQ0 813 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 KIFAP3Q92845 792 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 IGSF21Q96ID5 467 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 IFT74Q96LB3 600 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 PRIMPOLQ96LW4 560 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 TMEM175Q9BSA9 504 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 C1QTNF1Q9BXJ1 281 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 TRIM6Q9C030 488 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-209ENST00000567635 C2orf40Q9H1Z8 148 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 BHMT2Q9H2M3 363 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 FZD8Q9H461 694 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 PRMT7Q9NVM4 692 aaPredicted RBP7.65□□□□□ -1.18
SF3B3-209ENST00000567635 DNAJB4Q9UDY4 337 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 STK39Q9UEW8 545 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 GIT1Q9Y2X7 761 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 HES2Q9Y543 173 aa7.65□□□□□ -1.18
SF3B3-209ENST00000567635 C19orf67A6NJJ6 358 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 PI4K2BG5E9Z4 385 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 ACKR2O00590 384 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 INPPL1O15357 1258 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 CLASP2O75122 1294 aaKnown RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 NPTXRO95502 500 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 POMCP01189 267 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 CDC25AP30304 524 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 CA8P35219 290 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 EFNA5P52803 228 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 RBM10P98175 930 aaKnown RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 ZP2Q05996 745 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 PRPF4BQ13523 1007 aaKnown RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 CUL4AQ13619 759 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 KCNC3Q14003 757 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 GIT2Q14161 759 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 MAPK6Q16659 721 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 TMEM132AQ24JP5 1023 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 ARL6IP4Q66PJ3 421 aaKnown RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 CDCA2Q69YH5 1023 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 LLGL2Q6P1M3 1020 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 COLGALT2Q8IYK4 626 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 PLCD3Q8N3E9 789 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 KCTD17Q8N5Z5 321 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 SMRP1Q8NCR6 262 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 VN1R2Q8NFZ6 395 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 BSNDQ8WZ55 320 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 GAD1Q99259 594 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 POP1Q99575 1024 aaKnown RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 MMTAG2Q9BU76 263 aaKnown RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 APOL6Q9BWW8 343 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 BACH2Q9BYV9 841 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 EPHX3Q9H6B9 360 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 POLD4Q9HCU8 107 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 MIOSQ9NXC5 875 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 BARX2Q9UMQ3 279 aaPredicted RBP7.64□□□□□ -1.19
SF3B3-209ENST00000567635 IRAK3Q9Y616 596 aa7.64□□□□□ -1.19
SF3B3-209ENST00000567635 C2orf16Q68DN1 1984 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 VWA3AA6NCI4 1184 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 PP2D1A8MPX8 630 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 E9PMD0 336 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 K7ERI5 159 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 NRP1O14786 923 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 N4BP3O15049 544 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 B4GALT3O60512 393 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 NR1I2O75469 434 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 PRKCBP05771 671 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 CTSAP10619 480 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 ALADP13716 330 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 HOXB8P17481 243 aaPredicted RBP7.63□□□□□ -1.19
SF3B3-209ENST00000567635 LIG1P18858 919 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 PDCP20941 246 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 AKAP5P24588 427 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 MLH1P40692 756 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 OR1G1P47890 313 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 DSC1Q08554 894 aa7.63□□□□□ -1.19
SF3B3-209ENST00000567635 ZRSR1Q15695 479 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms