RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 Q4G0T1 1027 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 SEL1L2Q5TEA6 688 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 MIS18BP1Q6P0N0 1132 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 USP17L6PQ6QN14 398 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 FITM2Q8N6M3 262 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 RUSC1Q9BVN2 902 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 ANKIB1Q9P2G1 1089 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 APEX2Q9UBZ4 518 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 TNS1Q9HBL0 1735 aaKnown RBP16.85■□□□□ 0.29
COMMD4-215ENST00000566843 TBCAO75347 108 aaKnown RBP16.85■□□□□ 0.29
COMMD4-215ENST00000566843 RFX1P22670 979 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 LACTBP83111 547 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-215ENST00000566843 LMNB2Q03252 620 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 ICA1Q05084 483 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 RRP1BQ14684 758 aaKnown RBP16.85■□□□□ 0.29
COMMD4-215ENST00000566843 LRRC14Q15048 493 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 DPP8Q6V1X1 898 aaPredicted RBP16.85■□□□□ 0.29
COMMD4-215ENST00000566843 KIF2BQ8N4N8 673 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 CD101Q93033 1021 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 SPDL1Q96EA4 605 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 WNT8AQ9H1J5 351 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 CDC42EP4Q9H3Q1 356 aaKnown RBP16.85■□□□□ 0.29
COMMD4-215ENST00000566843 BCAS3Q9H6U6 928 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 AAASQ9NRG9 546 aa16.85■□□□□ 0.29
COMMD4-215ENST00000566843 UBR3Q6ZT12 1888 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 SKAP2O75563 359 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-215ENST00000566843 EYA4O95677 639 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 GYS1P13807 737 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 MAP2K1Q02750 393 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-215ENST00000566843 AP3B2Q13367 1082 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 NFIXQ14938 502 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 CBWD6Q4V339 395 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 CBWD3Q5JTY5 395 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 CBWD5Q5RIA9 395 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 NUGGCQ68CJ6 796 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 SLC13A5Q86YT5 568 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-215ENST00000566843 KCTD17Q8N5Z5 321 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 SLCO2A1Q92959 643 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 AKT1S1Q96B36 256 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 DMAC2Q9NW81 257 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 WHRNQ9P202 907 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 TCEA3O75764 348 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 CREB1P16220 341 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 SLC16A2P36021 539 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 EIF6P56537 245 aaKnown RBP16.84■□□□□ 0.29
COMMD4-215ENST00000566843 ACVR2BQ13705 512 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 LONRF1Q17RB8 773 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 CAPRIN2Q6IMN6 1127 aaKnown RBP16.84■□□□□ 0.29
COMMD4-215ENST00000566843 RHBDF2Q6PJF5 856 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 TPTE2Q6XPS3 522 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 MGARPQ8TDB4 240 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 POLR3CQ9BUI4 534 aaPredicted RBP16.84■□□□□ 0.29
COMMD4-215ENST00000566843 TRIM7Q9C029 511 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 USP40Q9NVE5 1235 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 CTTNBP2NLQ9P2B4 639 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 MTUS1Q9ULD2 1270 aa16.84■□□□□ 0.29
COMMD4-215ENST00000566843 A6NHS1 94 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 TP73O15350 636 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 ATP2A2P16615 1042 aaKnown RBP16.83■□□□□ 0.28
COMMD4-215ENST00000566843 GPC5P78333 572 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 ATP11AP98196 1134 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 ANKRD20A2Q5SQ80 823 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 ANKRD20A1Q5TYW2 823 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 ANKRD20A3Q5VUR7 823 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 CGB2Q6NT52 195 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 SLF2Q8IX21 1173 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 CCDC105Q8IYK2 499 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 LENG9Q96B70 501 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 DDX23Q9BUQ8 820 aaKnown RBP16.83■□□□□ 0.28
COMMD4-215ENST00000566843 UBE4BO95155 1302 aa16.83■□□□□ 0.28
COMMD4-215ENST00000566843 TCRBV7S2A1N4TA0A589 114 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 FOXN3O00409 490 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-215ENST00000566843 LUC7L3O95232 432 aaKnown RBP16.82■□□□□ 0.28
COMMD4-215ENST00000566843 PYGMP11217 842 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 COMTP21964 271 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 GCKP35557 465 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 ARHGAP4P98171 946 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 MIGA2Q7L4E1 593 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 SLC51AQ86UW1 340 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 ANKLE1Q8NAG6 615 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 LMO3Q8TAP4 145 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 ZNF483Q8TF39 744 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-215ENST00000566843 C7orf43Q8WVR3 580 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 GRAMD1AQ96CP6 724 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 RMDN2Q96LZ7 410 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 FAM20AQ96MK3 541 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 BHMT2Q9H2M3 363 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 LRRC19Q9H756 370 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 CD209Q9NNX6 404 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 SEPT11Q9NVA2 429 aaKnown RBP16.82■□□□□ 0.28
COMMD4-215ENST00000566843 GREB1LQ9C091 1923 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-215ENST00000566843 FTLP02792 175 aaPredicted RBP16.82■□□□□ 0.28
COMMD4-215ENST00000566843 MGAT5Q09328 741 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 GRAPQ13588 217 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 MPP2Q14168 576 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 PRR16Q569H4 304 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 PHLDB3Q6NSJ2 640 aa16.82■□□□□ 0.28
COMMD4-215ENST00000566843 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms