RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 TSPY26PQ9H489 355 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 RABEP2Q9H5N1 569 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 LRFN1Q9P244 771 aa11.72□□□□□ -0.53
UBFD1-205ENST00000566136 TMEM110-MUSTN1A8MSY1 372 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 VGLL3A8MV65 326 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 AOC2O75106 756 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 OFD1O75665 1012 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 CES1P23141 567 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 CHRNA5P30532 468 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
UBFD1-205ENST00000566136 IGFALSP35858 605 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 ITGA8P53708 1063 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 INHBEP58166 350 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 ANKRD1Q15327 319 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 CCDC57Q2TAC2 916 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 SLC30A6Q6NXT4 461 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 Q6ZUG5 572 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 STOX1Q6ZVD7 989 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 USP13Q92995 863 aaPredicted RBP11.71□□□□□ -0.53
UBFD1-205ENST00000566136 RFX7Q2KHR2 1363 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 ZEB2O60315 1214 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 JAK2O60674 1132 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 OSMP13725 252 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 CDC16Q13042 620 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 HLFQ16534 295 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 TTC39AQ5SRH9 613 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 ARHGAP27Q6ZUM4 889 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 CNKSR1Q969H4 720 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 TSGA13Q96PP4 275 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 YME1L1Q96TA2 773 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 TEX13BQ9BXU2 312 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 EPB41L4AQ9HCS5 686 aaPredicted RBP11.71□□□□□ -0.53
UBFD1-205ENST00000566136 SEC31BQ9NQW1 1179 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 IRAK4Q9NWZ3 460 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 ATP6V1DQ9Y5K8 247 aa11.71□□□□□ -0.53
UBFD1-205ENST00000566136 USO1O60763 962 aaKnown RBP11.7□□□□□ -0.54
UBFD1-205ENST00000566136 UBE2HP62256 183 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 PSMD6Q15008 389 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 MAJINQ3KP22 176 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 KMT5BQ4FZB7 885 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 PPP4R3BQ5MIZ7 849 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 OVOS1Q6IE37 1185 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 NSMFQ6X4W1 530 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 CPOQ8IVL8 374 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 ZNF527Q8NB42 609 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 GSTCDQ8NEC7 633 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 UTP15Q8TED0 518 aaKnown RBP11.7□□□□□ -0.54
UBFD1-205ENST00000566136 FGD4Q96M96 766 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 CNTNAP3BQ96NU0 1288 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 CNTNAP3Q9BZ76 1288 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 GPR108Q9NPR9 543 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 LRP2BPQ9P2M1 347 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 COQ6Q9Y2Z9 468 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 ZNF711Q9Y462 761 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 IFIT5Q13325 482 aaKnown RBP11.7□□□□□ -0.54
UBFD1-205ENST00000566136 PRSS53Q2L4Q9 553 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 TTLL5Q6EMB2 1281 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 CEP68Q76N32 757 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 RTKN2Q8IZC4 609 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 C19orf47Q8N9M1 422 aaKnown RBP11.7□□□□□ -0.54
UBFD1-205ENST00000566136 LRRN4CLQ8ND94 238 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 JADE3Q92613 823 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 PLSCR4Q9NRQ2 329 aa11.7□□□□□ -0.54
UBFD1-205ENST00000566136 TLL1O43897 1013 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 CIAO1O76071 339 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 EPHX1P07099 455 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 TRIM61Q5EBN2 209 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 CCDC183Q5T5S1 534 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 BRF1Q92994 677 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 GAL3ST3Q96A11 431 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 ZBED2Q9BTP6 218 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 SAMD15Q9P1V8 674 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 PIM2Q9P1W9 311 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 BRCA1P38398 1863 aaKnown RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 MAST3O60307 1309 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 DGKIO75912 1065 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 PCCAP05165 728 aaPredicted RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 ZMYM1Q5SVZ6 1142 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 PDE12Q6L8Q7 609 aaKnown RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 EPHX4Q8IUS5 362 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 IQCF2Q8IXL9 164 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 TEX9Q8N6V9 391 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 TMEM102Q8N9M5 508 aaPredicted RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 GABPB2Q8TAK5 448 aaPredicted RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 NTPCRQ9BSD7 190 aaKnown RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 WDR35Q9P2L0 1181 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 ADD3Q9UEY8 706 aaKnown RBP11.69□□□□□ -0.54
UBFD1-205ENST00000566136 PPM1HQ9ULR3 514 aa11.69□□□□□ -0.54
UBFD1-205ENST00000566136 MAP3K15Q6ZN16 1313 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 ASLP04424 464 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 SERPINB2P05120 415 aa11.68□□□□□ -0.54
UBFD1-205ENST00000566136 PMS1P54277 932 aaKnown RBP11.68□□□□□ -0.54
UBFD1-205ENST00000566136 MRPL28Q13084 256 aaKnown RBP11.68□□□□□ -0.54
UBFD1-205ENST00000566136 SCARF1Q14162 830 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms