RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 P4HA1P13674 534 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 IL2RBP14784 551 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 DPEP1P16444 411 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 GUCY2CP25092 1073 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 TECP42680 631 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 IL1RL1Q01638 556 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 GRB10Q13322 594 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 BMP2KLQ5H9B9 411 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 PDE12Q6L8Q7 609 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 KIAA1211LQ6NV74 962 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 KIF6Q6ZMV9 814 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 TTC7BQ86TV6 843 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 MYOCDQ8IZQ8 938 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 PDCL2Q8N4E4 241 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 RTF1Q92541 710 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 USP13Q92995 863 aaPredicted RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 ZUFSPQ96AP4 578 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 DDX11Q96FC9 970 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 GDAP1L1Q96MZ0 367 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 NOX5Q96PH1 765 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 SH3GL1Q99961 368 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 MAK16Q9BXY0 300 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 SLC13A1Q9BZW2 595 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 PNNQ9H307 717 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 ANAPC5Q9UJX4 755 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 CPSF3Q9UKF6 684 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 DUSP12Q9UNI6 340 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 POLHQ9Y253 713 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 KIF3AQ9Y496 699 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 PCDHGA11Q9Y5H2 935 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 TNPO3Q9Y5L0 923 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 SIPA1L3O60292 1781 aaPredicted RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 ARHGEF37A1IGU5 675 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 TAF4O00268 1085 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 OFD1O75665 1012 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 RFPL1O75677 317 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 FLOT1O75955 427 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 PRKD3O94806 890 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 S1PR4O95977 384 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 ATP5BP06576 529 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 C6orf222P0C671 652 aaPredicted RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 TYRP1P17643 537 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 VPS41P49754 854 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 TUBP50607 506 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 KRT17Q04695 432 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 ZNF252P-AS1Q0IIN9 211 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 UAP1L1Q3KQV9 507 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 UTP14CQ5TAP6 766 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 PIK3R6Q5UE93 754 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 DIEXFQ68CQ4 756 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 THAP5Q7Z6K1 395 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 CCDC116Q8IYX3 515 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 VPS52Q8N1B4 723 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 CRIPAKQ8N1N5 446 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 KCTD6Q8NC69 237 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 IPMKQ8NFU5 416 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 MOSPD2Q8NHP6 518 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 PPP1R35Q8TAP8 253 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 IQCDQ96DY2 449 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 PRAM1Q96QH2 718 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 C7orf25Q9BPX7 421 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 LSM14BQ9BX40 385 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 OSBPL3Q9H4L5 887 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 SYNDIG1Q9H7V2 258 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 OSGEPQ9NPF4 335 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 C1orf112Q9NSG2 853 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 THG1LQ9NWX6 298 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 CWC15Q9P013 229 aaKnown RBP3.35□□□□□ -1.87
CHD9-216ENST00000565803 TBC1D29Q9UFV1 150 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 ZNF711Q9Y462 761 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 UTRNP46939 3433 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 ANKRD36CQ5JPF3 1778 aa3.35□□□□□ -1.87
CHD9-216ENST00000565803 C17orf113A0A1B0GUU1 675 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 hCG_1807616A0A1W2PRN6 198 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 HMX3A6NHT5 357 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 ZNF891A8MT65 544 aaPredicted RBP3.34□□□□□ -1.87
CHD9-216ENST00000565803 IRAK2O43187 625 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 NCK2O43639 380 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 USO1O60763 962 aaKnown RBP3.34□□□□□ -1.87
CHD9-216ENST00000565803 AVPP01185 164 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 ENPP1P22413 925 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 IGFBP4P22692 258 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 SMCPP49901 116 aaPredicted RBP3.34□□□□□ -1.87
CHD9-216ENST00000565803 ZNF165P49910 485 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 TKTL1P51854 596 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 BLMHQ13867 455 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 GTF2H3Q13889 308 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 TNIP1Q15025 636 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 DBN1Q16643 649 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 AMOTQ4VCS5 1084 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 BOLA3Q53S33 107 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 DCAF17Q5H9S7 520 aaPredicted RBP3.34□□□□□ -1.87
CHD9-216ENST00000565803 SLC6A19Q695T7 634 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 ZNF574Q6ZN55 896 aaPredicted RBP3.34□□□□□ -1.87
CHD9-216ENST00000565803 CYP2U1Q7Z449 544 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 ZNF438Q7Z4V0 828 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 BRAPQ7Z569 592 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 TRIM74Q86UV6 250 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 TRIM73Q86UV7 250 aa3.34□□□□□ -1.87
CHD9-216ENST00000565803 ANKRD35Q8N283 1001 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms