RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 KATNAL1Q9BW62 490 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 RASSF4Q9H2L5 321 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 ABCB6Q9NP58 842 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 CETN3O15182 167 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 ASAP2O43150 1006 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 F2P00734 622 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 TMOD1P28289 359 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 ARHGAP25P42331 645 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 COPB1P53618 953 aaKnown RBP10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 MYBPC2Q14324 1141 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 CASP8Q14790 479 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 MAP9Q49MG5 647 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 WDR93Q6P2C0 686 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 SLAIN1Q8ND83 568 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 DEPTORQ8TB45 409 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 PSPC1Q8WXF1 523 aaKnown RBP10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 TMEM143Q96AN5 459 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 SUGCTQ9HAC7 445 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 MYO6Q9UM54 1294 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 TBX20Q9UMR3 447 aa10.26□□□□□ -0.77
CNEP1R1-206ENST00000565556 A0A0U1RQJ8 604 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 DENND3A2RUS2 1198 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 TGFB1I1O43294 461 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 NR3C1P04150 777 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 MYL3P08590 195 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 RHOXF2BP0C7M4 288 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 ELNP15502 786 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 GLRA2P23416 452 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 NR2F2P24468 414 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 KLRC1P26715 233 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 GYS2P54840 703 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 SOX10P56693 466 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 VSNL1P62760 191 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 AMPD2Q01433 879 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 PPFIA1Q13136 1202 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 ADAM9Q13443 819 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 TFDP1Q14186 410 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 MAP3K21Q5TCX8 1036 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 EFCAB12Q6NXP0 572 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 LRRC55Q6ZSA7 311 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 TMEM174Q8WUU8 243 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 PRPF31Q8WWY3 499 aaKnown RBP10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 ATRIPQ8WXE1 791 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 BSNDQ8WZ55 320 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 LENG1Q96BZ8 264 aaPredicted RBP10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 CNOT6LQ96LI5 555 aaKnown RBP10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 RHOXF2Q9BQY4 288 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 VIPAS39Q9H9C1 493 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 ARHGAP28Q9P2N2 729 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 SUCLA2Q9P2R7 463 aaPredicted RBP10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 FAN1Q9Y2M0 1017 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 NRCAMQ92823 1304 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZMYM2Q9UBW7 1377 aa10.25□□□□□ -0.77
CNEP1R1-206ENST00000565556 MYO1CO00159 1063 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 HAS3O00219 553 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 SLC16A3O15427 465 aaKnown RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 C22orf31O95567 290 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 C6orf222P0C671 652 aaPredicted RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 MTIF2P46199 727 aaKnown RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 PSEN2P49810 448 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 EFNA5P52803 228 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 CKAP4Q07065 602 aaKnown RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 KCNA1Q09470 495 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 STRN3Q13033 797 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 TRIM32Q13049 653 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 MFSD10Q14728 455 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 GRIK4Q16099 956 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 KIAA0753Q2KHM9 967 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 GNASQ5JWF2 1037 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 SRLQ86TD4 932 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 SLC9A9Q8IVB4 645 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 MAP4K3Q8IVH8 894 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 C12orf56Q8IXR9 622 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 METTL13Q8N6R0 699 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 GOLGA6L1Q8N7Z2 621 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 EHBP1Q8NDI1 1231 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 ASAP3Q8TDY4 903 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 RPGRIP1Q96KN7 1286 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 TUBGCP2Q9BSJ2 902 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 C2orf40Q9H1Z8 148 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 HAUS4Q9H6D7 363 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 TMEM134Q9H6X4 195 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 RRP15Q9Y3B9 282 aaKnown RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 EVPLQ92817 2033 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 LRRIQ4A6NIV6 560 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 K7ERI5 159 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 MSCO60682 206 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 GNAT1P11488 350 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 KRT9P35527 623 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 MARSP56192 900 aaKnown RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 C1QTNF8P60827 252 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 IGBP1P78318 339 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 PURAQ00577 322 aaKnown RBP10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 CDC42EP1Q00587 391 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 BEX3Q00994 111 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 POU5F1BQ06416 359 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 LAMTOR4Q0VGL1 99 aa10.24□□□□□ -0.77
CNEP1R1-206ENST00000565556 CCDC40Q4G0X9 1142 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms