RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 AUTS2Q8WXX7 1259 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 GAD1Q99259 594 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 APOL5Q9BWW9 433 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 NXF3Q9H4D5 531 aaKnown RBP15.07■□□□□ 0
VPS9D1-204ENST00000565023 CD320Q9NPF0 282 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 PRMT7Q9NVM4 692 aaPredicted RBP15.07■□□□□ 0
VPS9D1-204ENST00000565023 KLK14Q9P0G3 267 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 PARP2Q9UGN5 583 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 DNM3Q9UQ16 869 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 LZTS1Q9Y250 596 aa15.07■□□□□ 0
VPS9D1-204ENST00000565023 TTLL13PA6NNM8 815 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 MBTPS2O43462 519 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 PRKCBP05771 671 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 HSP90AA1P07900 732 aaKnown RBP15.06■□□□□ 0
VPS9D1-204ENST00000565023 GALTP07902 379 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 MUTP22033 750 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 PRPHP41219 470 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 SCNN1GP51170 649 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 RAD51AP2Q09MP3 1159 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 COL19A1Q14993 1142 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 DUSP6Q16828 381 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 PUS10Q3MIT2 529 aaKnown RBP15.06■□□□□ 0
VPS9D1-204ENST00000565023 KCNK18Q7Z418 384 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 BRAPQ7Z569 592 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 FAM178BQ8IXR5 827 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 VPS52Q8N1B4 723 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 CNNM3Q8NE01 707 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 CCDC51Q96ER9 411 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 CDK5RAP3Q96JB5 506 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 IFT74Q96LB3 600 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 ZFP42Q96MM3 310 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 MMTAG2Q9BU76 263 aaKnown RBP15.06■□□□□ 0
VPS9D1-204ENST00000565023 MTMR6Q9Y217 621 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 FAM50BQ9Y247 325 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 PRG3Q9Y2Y8 225 aaPredicted RBP15.06■□□□□ 0
VPS9D1-204ENST00000565023 STK24Q9Y6E0 443 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 CNTNAP2Q9UHC6 1331 aa15.06■□□□□ 0
VPS9D1-204ENST00000565023 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.05■□□□□ -0
VPS9D1-204ENST00000565023 CCDC169A6NNP5 214 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 EYA4O95677 639 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 CXCL14O95715 111 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 NAMPTP43490 491 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 OR1G1P47890 313 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 PRPF4BQ13523 1007 aaKnown RBP15.05■□□□□ -0
VPS9D1-204ENST00000565023 SMC1AQ14683 1233 aaKnown RBP15.05■□□□□ -0
VPS9D1-204ENST00000565023 PCBP1Q15365 356 aaKnown RBP eCLIP15.05■□□□□ -0
VPS9D1-204ENST00000565023 PDE12Q6L8Q7 609 aaKnown RBP15.05■□□□□ -0
VPS9D1-204ENST00000565023 SLC27A1Q6PCB7 646 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 HACE1Q8IYU2 909 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 GJD3Q8N144 294 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 TMEM87AQ8NBN3 555 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 VN1R2Q8NFZ6 395 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 IGSF21Q96ID5 467 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 RUSC1Q9BVN2 902 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 NFKBIZQ9BYH8 718 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 C2orf40Q9H1Z8 148 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 NGRNQ9NPE2 291 aaKnown RBP15.05■□□□□ -0
VPS9D1-204ENST00000565023 MIOSQ9NXC5 875 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 CLEC1BQ9P126 229 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 FAN1Q9Y2M0 1017 aa15.05■□□□□ -0
VPS9D1-204ENST00000565023 ARL5CA6NH57 179 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 STX6O43752 255 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 HIP1RO75146 1068 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 EDN1P05305 212 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 PEX3P56589 373 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 RESTQ13127 1097 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 SMAD4Q13485 552 aaKnown RBP15.04■□□□□ -0
VPS9D1-204ENST00000565023 PPP2R5AQ15172 486 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 MAPK6Q16659 721 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 EEF1DP3Q658K8 133 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 CDCA2Q69YH5 1023 aaPredicted RBP15.04■□□□□ -0
VPS9D1-204ENST00000565023 KHSRPQ92945 711 aaKnown RBP eCLIP15.04■□□□□ -0
VPS9D1-204ENST00000565023 PNMA5Q96PV4 448 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 RPS6KC1Q96S38 1066 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 EPHX3Q9H6B9 360 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 UBN1Q9NPG3 1134 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 KANSL3Q9P2N6 904 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 TRIP11Q15643 1979 aa15.04■□□□□ -0
VPS9D1-204ENST00000565023 A0A1B0GUA9 196 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 C2orf71A6NGG8 1288 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 SFI1A8K8P3 1242 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 C2CD2LO14523 706 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 NRP1O14786 923 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 N4BP3O15049 544 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 ALDH2P05091 517 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 PDIA4P13667 645 aaKnown RBP15.03■□□□□ -0
VPS9D1-204ENST00000565023 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
VPS9D1-204ENST00000565023 DHX8Q14562 1220 aaKnown RBP15.03■□□□□ -0
VPS9D1-204ENST00000565023 BMS1Q14692 1282 aaKnown RBP15.03■□□□□ -0
VPS9D1-204ENST00000565023 SF3A1Q15459 793 aaKnown RBP15.03■□□□□ -0
VPS9D1-204ENST00000565023 RINT1Q6NUQ1 792 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 FAM173BQ6P4H8 233 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 CABP7Q86V35 215 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 RASSF8Q8NHQ8 419 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 RSPH1Q8WYR4 309 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 RABGGTAQ92696 567 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 KIFAP3Q92845 792 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 MSLNLQ96KJ4 702 aa15.03■□□□□ -0
VPS9D1-204ENST00000565023 PRIMPOLQ96LW4 560 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms