RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 PPP3CAQ08209 521 aa21.27■■□□□ 1
CLN6-205ENST00000564846 C1orf220Q5T0J3 134 aa21.27■■□□□ 1
CLN6-205ENST00000564846 KIF18AQ8NI77 898 aa21.27■■□□□ 1
CLN6-205ENST00000564846 PLEKHO2Q8TD55 490 aa21.27■■□□□ 1
CLN6-205ENST00000564846 PARD3BQ8TEW8 1205 aa21.27■■□□□ 1
CLN6-205ENST00000564846 SPAG5Q96R06 1193 aa21.27■■□□□ 1
CLN6-205ENST00000564846 TARS2Q9BW92 718 aaKnown RBP21.27■■□□□ 1
CLN6-205ENST00000564846 MRPL4Q9BYD3 311 aaKnown RBP21.27■■□□□ 1
CLN6-205ENST00000564846 Q9Y3F1 56 aa21.27■■□□□ 1
CLN6-205ENST00000564846 LDHAP00338 332 aaKnown RBP21.26■□□□□ 0.99
CLN6-205ENST00000564846 TMOD1P28289 359 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 MAPK8IP2Q13387 824 aaPredicted RBP21.26■□□□□ 0.99
CLN6-205ENST00000564846 RAPGEF1Q13905 1077 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 MAPK6Q16659 721 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 TLK2Q86UE8 772 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 LINC01465Q8N7H1 131 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 EHBP1Q8NDI1 1231 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 FAM213AQ9BRX8 229 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 NFKBIZQ9BYH8 718 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 INTS2Q9H0H0 1204 aaKnown RBP21.26■□□□□ 0.99
CLN6-205ENST00000564846 AGO2Q9UKV8 859 aaKnown RBP21.26■□□□□ 0.99
CLN6-205ENST00000564846 FHOD1Q9Y613 1164 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 DOCK3Q8IZD9 2030 aa21.26■□□□□ 0.99
CLN6-205ENST00000564846 MSCO60682 206 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 RFX1P22670 979 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 CTGFP29279 349 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 GTF2H1P32780 548 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 GCLMP48507 274 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 MXI1P50539 228 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 CLCN3P51790 818 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 ZNF592Q92610 1267 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 DEF6Q9H4E7 631 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 A0A0B4J269 797 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 TERF1P54274 439 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 PPFIA1Q13136 1202 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 ASIC2Q16515 512 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 HGSNATQ68CP4 663 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 CCDC127Q96BQ5 260 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 NLRP4Q96MN2 994 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 TMEM8AQ9HCN3 771 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 APEX2Q9UBZ4 518 aa21.25■□□□□ 0.99
CLN6-205ENST00000564846 REXO2Q9Y3B8 237 aaKnown RBP21.25■□□□□ 0.99
CLN6-205ENST00000564846 LRRIQ3A6PVS8 624 aaPredicted RBP21.24■□□□□ 0.99
CLN6-205ENST00000564846 TOM1L1O75674 476 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 PRKCBP05771 671 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 PLEKP08567 350 aaPredicted RBP21.24■□□□□ 0.99
CLN6-205ENST00000564846 EIF4A3P38919 411 aaKnown RBP21.24■□□□□ 0.99
CLN6-205ENST00000564846 PSMC4P43686 418 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 CPT1AP50416 773 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 LACTBP83111 547 aaPredicted RBP21.24■□□□□ 0.99
CLN6-205ENST00000564846 SPA17Q15506 151 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 GRIK4Q16099 956 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 DEFB115Q30KQ5 88 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 EPC2Q52LR7 807 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 ARHGAP29Q52LW3 1261 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 KRT39Q6A163 491 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 IQCEQ6IPM2 695 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 MTHFD1LQ6UB35 978 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 ZNF662Q6ZS27 426 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 FMNL3Q8IVF7 1028 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 LMO3Q8TAP4 145 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 STK33Q9BYT3 514 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 TMEM117Q9H0C3 514 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 LZTFL1Q9NQ48 299 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 ANKFY1Q9P2R3 1169 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 USP20Q9Y2K6 914 aa21.24■□□□□ 0.99
CLN6-205ENST00000564846 RRN3P2A6NIE6 340 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 LCA5LO95447 670 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 F2P00734 622 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 MATR3P43243 847 aaKnown RBP eCLIP21.23■□□□□ 0.99
CLN6-205ENST00000564846 KIF11P52732 1056 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 JAM2P57087 298 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 PTENP60484 403 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 TDRD12Q587J7 1177 aaKnown RBP21.23■□□□□ 0.99
CLN6-205ENST00000564846 SYT10Q6XYQ8 523 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 ZBTB10Q96DT7 871 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 MSTO1Q9BUK6 570 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 AP5M1Q9H0R1 490 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 FZD8Q9H461 694 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 BZW2Q9Y6E2 419 aaKnown RBP21.23■□□□□ 0.99
CLN6-205ENST00000564846 ACKR2O00590 384 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 CLDN3O15551 220 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 AKR1B10O60218 316 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 EDN1P05305 212 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 PSMD6Q15008 389 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 ASTE1Q2TB18 679 aaPredicted RBP21.23■□□□□ 0.99
CLN6-205ENST00000564846 ZBTB45Q96K62 511 aaPredicted RBP21.23■□□□□ 0.99
CLN6-205ENST00000564846 ACO2Q99798 780 aaKnown RBP21.23■□□□□ 0.99
CLN6-205ENST00000564846 HAPLN2Q9GZV7 340 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 HAUS4Q9H6D7 363 aa21.23■□□□□ 0.99
CLN6-205ENST00000564846 KIF5CO60282 957 aa21.22■□□□□ 0.99
CLN6-205ENST00000564846 AKR1A1P14550 325 aa21.22■□□□□ 0.99
CLN6-205ENST00000564846 PHKA2P46019 1235 aa21.22■□□□□ 0.99
CLN6-205ENST00000564846 NLRP11P59045 1033 aaKnown RBP21.22■□□□□ 0.99
CLN6-205ENST00000564846 CLDN10P78369 228 aa21.22■□□□□ 0.99
CLN6-205ENST00000564846 KLHL30Q0D2K2 578 aa21.22■□□□□ 0.99
CLN6-205ENST00000564846 IFNLR1Q8IU57 520 aaPredicted RBP21.22■□□□□ 0.99
CLN6-205ENST00000564846 VTI1AQ96AJ9 217 aa21.22■□□□□ 0.99
CLN6-205ENST00000564846 CAPNS2Q96L46 248 aa21.22■□□□□ 0.99
CLN6-205ENST00000564846 DNAJC12Q9UKB3 198 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms