RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 TTC27Q6P3X3 843 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 H2AFVQ71UI9 128 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 AMFRQ9UKV5 643 aa17.49■□□□□ 0.39
LINC00554-201ENST00000564841 GDF11O95390 407 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 CBX6O95503 412 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 AFPP02771 609 aaKnown RBP17.48■□□□□ 0.39
LINC00554-201ENST00000564841 GBP1P32455 592 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 KLC1Q07866 573 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 COASYQ13057 564 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 VSIG1Q86XK7 387 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 TEX9Q8N6V9 391 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 SLC35G2Q8TBE7 412 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 PRKAG3Q9UGI9 489 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 TCRBV7S2A1N4TA0A589 114 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 CLRN2A0PK11 232 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 PALM3A6NDB9 673 aaPredicted RBP17.48■□□□□ 0.39
LINC00554-201ENST00000564841 DDX3YO15523 660 aaKnown RBP17.48■□□□□ 0.39
LINC00554-201ENST00000564841 ALDH3A1P30838 453 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 PPP1R2P41236 205 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 CALCRLQ16602 461 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 SLC30A10Q6XR72 485 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 SLFN11Q7Z7L1 901 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 CYP4X1Q8N118 509 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 SNX29Q8TEQ0 813 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 DNAJC9Q8WXX5 260 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 AK8Q96MA6 479 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 PWWP2AQ96N64 755 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 BCAS3Q9H6U6 928 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 CYP39A1Q9NYL5 469 aa17.48■□□□□ 0.39
LINC00554-201ENST00000564841 GFPT2O94808 682 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 PDCD2Q16342 344 aaPredicted RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 GLYCTKQ8IVS8 523 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 KIAA1683Q9H0B3 1180 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 MAGEF1Q9HAY2 307 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 PICK1Q9NRD5 415 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 KLHL14Q9P2G3 628 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 ANKRD31Q8N7Z5 1873 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 DDTLA6NHG4 134 aaPredicted RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 TMEM110-MUSTN1A8MSY1 372 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 NPTXRO95502 500 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 SCNN1BP51168 640 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 MRPS35P82673 323 aaKnown RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 DCAF17Q5H9S7 520 aaPredicted RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 PRUNE1Q86TP1 453 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 REXO1Q8N1G1 1221 aaKnown RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 ARHGEF26Q96DR7 871 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 FAM163AQ96GL9 167 aaPredicted RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 DENND2DQ9H6A0 471 aaPredicted RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 CCNB1P14635 433 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 FOXN2P32314 431 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 MAPK7Q13164 816 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 EXOC3L4Q17RC7 722 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 MUM1Q2TAK8 710 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 OR52E8Q6IFG1 317 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 RFWD3Q6PCD5 774 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 CPNE8Q86YQ8 564 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 C6orf50Q9HD87 102 aa17.47■□□□□ 0.39
LINC00554-201ENST00000564841 ZNF277Q9NRM2 450 aaPredicted RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 ARMCX3Q9UH62 379 aaPredicted RBP17.47■□□□□ 0.39
LINC00554-201ENST00000564841 PVALEFA0A1B0GWK0 134 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 COBLL1Q53SF7 1204 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 TCERG1LQ5VWI1 586 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 DPY19L2P1Q6NXN4 242 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 ARHGAP22Q7Z5H3 698 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 TRIM74Q86UV6 250 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 TRIM73Q86UV7 250 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 GBP7Q8N8V2 638 aaPredicted RBP17.46■□□□□ 0.39
LINC00554-201ENST00000564841 KRT35Q92764 455 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 TBC1D10AQ9BXI6 508 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 ADAM33Q9BZ11 813 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 TAS2R14Q9NYV8 317 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 ABCB11O95342 1321 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 HLA-DOAP06340 250 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 GNAQP50148 359 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 FAM26FQ5R3K3 315 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 PODNQ7Z5L7 613 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 PALB2Q86YC2 1186 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 RAD54LQ92698 747 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 KIFAP3Q92845 792 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 TRIM7Q9C029 511 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 SLCO1B3Q9NPD5 702 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 NMRK1Q9NWW6 199 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 MTMR4Q9NYA4 1195 aa17.46■□□□□ 0.39
LINC00554-201ENST00000564841 E9PMD0 336 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 ZBTB7AO95365 584 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 BRAFP15056 766 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 STAT3P40763 770 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 PTGIRP43119 386 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 RCN2Q14257 317 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 APBB1IPQ7Z5R6 666 aaPredicted RBP17.45■□□□□ 0.38
LINC00554-201ENST00000564841 LNX1Q8TBB1 728 aaPredicted RBP17.45■□□□□ 0.38
LINC00554-201ENST00000564841 ASAP3Q8TDY4 903 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 SEPT11Q9NVA2 429 aaKnown RBP17.45■□□□□ 0.38
LINC00554-201ENST00000564841 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 KIAA1551Q9HCM1 1747 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 BTNL10A8MVZ5 291 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 TCP10L2B9ZVM9 353 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 PON1P27169 355 aa17.45■□□□□ 0.38
LINC00554-201ENST00000564841 STX2P32856 288 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms